RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 hADV38S2A0JD32 116 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PRSS38A1L453 326 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PSMB11A5LHX3 300 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 B4DGG1 531 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM250H0YL14 139 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 H3BRM9 83 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 FFAR1O14842 300 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 DDAH2O95865 285 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MT-ND6P03923 174 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MAS1P04201 325 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 CRISP2P16562 243 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 CD22P20273 847 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 NPY1RP25929 384 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 RBMXP38159 391 aaKnown RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC6A12P48065 614 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 LIM2P55344 173 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 TAS2R46P59540 309 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 YPEL3P61236 119 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 TIAL1Q01085 375 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF117Q03924 483 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 FOXF1Q12946 379 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 IL15RAQ13261 267 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 RAB32Q13637 225 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 GGTLC2Q14390 218 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 INSL4Q14641 139 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PDGFRLQ15198 375 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MPV17LQ2QL34 196 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PRICKLE4Q2TBC4 344 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ANKRD55Q3KP44 614 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 CCSMST1Q4G0I0 132 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR10J3Q5JRS4 329 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PSMG4Q5JS54 123 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 FFAR4Q5NUL3 377 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 C9orf50Q5SZB4 431 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 INO80CQ6PI98 192 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 STAC2Q6ZMT1 411 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 LINC00696Q6ZRV3 163 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 CYP2G1PQ6ZSU1 146 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 OLIG3Q7RTU3 272 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 AMZ2Q86W34 360 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMPRSS12Q86WS5 348 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 BAGE3Q86Y29 109 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 BAGE2Q86Y30 109 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF808Q8N4W9 903 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ST6GALNAC3Q8NDV1 305 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR2Z1Q8NG97 314 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR13G1Q8NGZ3 307 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 IL17DQ8TAD2 202 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 FNDC9Q8TBE3 224 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PLPPR1Q8TBJ4 325 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 APOBEC4Q8WW27 367 aaKnown RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MAL2Q969L2 176 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PTH2Q96A98 100 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 C5orf30Q96GV9 206 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ABHD14BQ96IU4 210 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF681Q96N22 645 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 DERL3Q96Q80 235 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR6C1Q96RD1 312 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 HSPB9Q9BQS6 159 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ABHD14AQ9BUJ0 271 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MANBALQ9NQG1 85 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 LANCL2Q9NS86 450 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PIGVQ9NUD9 493 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 DECR2Q9NUI1 292 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MED29Q9NX70 200 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ANKRD10Q9NXR5 420 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PLA2G3Q9NZ20 509 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 RABAC1Q9UI14 185 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PILRBQ9UKJ0 227 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 ERG28Q9UKR5 140 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 BOKQ9UMX3 212 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 UFC1Q9Y3C8 167 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 SIRT4Q9Y6E7 314 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PXMP4Q9Y6I8 212 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 MCM3APO60318 1980 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 KCPQ6ZWJ8 1503 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 PLXND1Q9Y4D7 1925 aa4.15□□□□□ -1.74
HMGB1P19-201ENST00000517578 COL14A1Q05707 1796 aaKnown RBP4.15□□□□□ -1.74
HMGB1P19-201ENST00000517578 A0A0J9YY10 115 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 LOC102723971A0A1B0GUV8 181 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 hCG_38984A0A1B0GV85 526 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SMIM35A0A1B0GVV1 85 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 A0A1B0GX78 115 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 MEIS3P1A6NDR6 274 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANTXRLA6NF34 631 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 IGLON5A6NGN9 336 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SERINC4A6NH21 518 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF732B4DXR9 585 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 F8W1H4 67 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 F8WDY8 70 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 H0YIZ8 118 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC17A2O00624 439 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TAX1BP3O14907 124 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 PHF1O43189 567 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ALOX12BO75342 701 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 FOXH1O75593 365 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CNIH1O95406 144 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM50AO95807 157 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 NGFRP08138 427 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 LAMP2P13473 410 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms