RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ARF6P62330 175 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MXD1Q05195 221 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF146Q15072 292 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 P2RY14Q15391 338 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RAB11BQ15907 218 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TAF9Q16594 264 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C2orf76Q3KRA6 126 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TIMM50Q3ZCQ8 353 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SPIN3Q5JUX0 258 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ATAD3CQ5T2N8 411 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HES5Q5TA89 166 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ELP2Q6IA86 826 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CCDC144NLQ6NUI1 221 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CD200R1LQ6Q8B3 271 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GDPD3Q7L5L3 318 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GPR141Q7Z602 305 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR4M2Q8NGB6 313 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR4M1Q8NGD0 313 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR5D13Q8NGL4 314 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 YIPF6Q96EC8 236 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BEX2Q9BXY8 128 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SELENOIQ9C0D9 397 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CHST6Q9GZX3 395 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM234AQ9H0X4 552 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BANF2Q9H503 90 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RNF167Q9H6Y7 350 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GHRLQ9UBU3 117 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF222Q9UK12 451 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HSF4Q9ULV5 492 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ST3GAL6Q9Y274 331 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 INSIG2Q9Y5U4 225 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ARHGAP32A7KAX9 2087 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PPIAL4CA0A0B4J2A2 164 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A0G2JK05 382 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A1W2PQ09 198 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A8MXK9 166 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 INAFM1C9JVW0 142 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SLC17A2O00624 439 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HSPB6O14558 160 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GEMIN2O14893 280 aaKnown RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ENSAO43768 121 aaKnown RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FCN3O75636 299 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR7C1O76099 320 aaPredicted RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR2H2O95918 312 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TFAP2AP05549 437 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LIPFP07098 398 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 UBBP0CG47 229 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PPIAL4GP0DN37 164 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ARSBP15848 533 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MGMTP16455 207 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LMO1P25800 156 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SDC2P34741 201 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SRP14P37108 136 aaKnown RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CAV3P56539 151 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 EDDM3BP56851 147 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR10A3P58181 314 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PAX8Q06710 450 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 EDDM3AQ14507 147 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IL13RA2Q14627 380 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GRK1Q15835 563 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BAK1Q16611 211 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PIGYQ3MUY2 71 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C1orf100Q5SVJ3 147 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM120AOSQ5T036 256 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GPR107Q5VW38 600 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR10K2Q6IF99 312 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 Q6P435 159 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GDPGP1Q6ZNW5 385 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C17orf107Q6ZR85 190 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TPRA1Q86W33 373 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LYPD6Q86Y78 171 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM185AQ8N0U4 392 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BPIFB2Q8N4F0 458 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TMEM104Q8NE00 496 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR4S1Q8NGB4 309 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR51D1Q8NGF3 324 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR51T1Q8NGJ9 327 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR6M1Q8NGM8 313 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR13F1Q8NGS4 319 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KCNG3Q8TAE7 436 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MRPS24Q96EL2 167 aaKnown RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GFI1Q99684 422 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DCTN5Q9BTE1 182 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FUNDC2Q9BWH2 189 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BARHL1Q9BZE3 327 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SHARPINQ9H0F6 387 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CST11Q9H112 138 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SEBOXQ9HB31 216 aaPredicted RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IL36GQ9NZH8 169 aa4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RPUSD1Q9UJJ7 312 aaKnown RBP4.78□□□□□ -1.64
SCARNA6.1-201ENST00000516989 AUP1Q9Y679 476 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms