RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NFYBP25208 207 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 GUK1Q16774 197 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 HIKESHIQ53FT3 197 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 FAM219AQ8IW50 185 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 TOMM40LQ969M1 308 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 MSI2Q96DH6 328 aaKnown RBP9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 AKR1E2Q96JD6 320 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 C12orf57Q99622 126 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 IFT22Q9H7X7 185 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 CACNA1GO43497 2377 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 APC2O95996 2303 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 ACACAQ13085 2346 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 MED12LQ86YW9 2145 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF816-ZNF321PA0A0X1KG74 233 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 hCG_38984A0A1B0GV85 526 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 C5orf49A4QMS7 147 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 BTBD17A6NE02 478 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 UMAD1C9J7I0 102 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 IL18BPO95998 194 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 IGHG3P01860 377 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 OR8U9P0C7N5 309 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 FUT3P21217 361 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 MEOX2P50222 304 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF266Q14584 549 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 RHEBQ15382 184 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 OR10AD1Q8NGE0 317 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 OR8U1Q8NH10 309 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 SFT2D1Q8WV19 159 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 ZCCHC14Q8WYQ9 949 aaKnown RBP9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 MARS2Q96GW9 593 aaKnown RBP9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 TCEAL7Q9BRU2 100 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 UNKLQ9H9P5 680 aaKnown RBP9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 C19orf12Q9NSK7 152 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 DKK4Q9UBT3 224 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 ARHGAP21Q5T5U3 1957 aa9.45□□□□□ -0.9
SH3RF1-203ENST00000508685 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 AGPAT2O15120 278 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SPRY1O43609 319 aaPredicted RBP9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 ANGPTL7O43827 346 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 CEACAM4O75871 244 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 MMP9P14780 707 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 OPRM1P35372 400 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 MIDNQ504T8 468 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SLC22A25Q6T423 547 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 LYZL2Q7Z4W2 148 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 NAXEQ8NCW5 288 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 Q8NFD4 153 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 OR1J1Q8NGS3 322 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 ERGIC1Q969X5 290 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 C1QTNF5Q9BXJ0 243 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 PRDM14Q9GZV8 571 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SLC25A31Q9H0C2 315 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 RPS10P5Q9NQ39 176 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 ST3GAL6Q9Y274 331 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SVILO95425 2214 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 PCP4L1A6NKN8 68 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 GEMIN2O14893 280 aaKnown RBP9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 KLK10O43240 276 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 HSPA12AO43301 675 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 DIRAS3O95661 229 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 PRH1P02810 166 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 S100A6P06703 90 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 CTXN2P0C2S0 81 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 KCNJ3P48549 501 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 PPT1P50897 306 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 RND3P61587 244 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 FBXW9Q5XUX1 488 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SAXO1Q8IYX7 474 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 FBXL14Q8N1E6 418 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SECTM1Q8WVN6 248 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SPSB4Q96A44 273 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 C14orf79Q96F83 325 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 TAAR6Q96RI8 345 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 TRIB1Q96RU8 372 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 EIF5A2Q9GZV4 153 aaKnown RBP9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 LIME1Q9H400 295 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 ESRP2Q9H6T0 727 aaKnown RBP9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 KCNJ16Q9NPI9 418 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 ZZEF1O43149 2961 aa9.44□□□□□ -0.9
SH3RF1-203ENST00000508685 C9JQL5 133 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 MSTNO14793 375 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 MPPED1O15442 326 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 PHF1O43189 567 aaPredicted RBP9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 LMO1P25800 156 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 RBM11P57052 281 aaKnown RBP9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 FXYD4P59646 89 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 B2MP61769 119 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF616Q08AN1 781 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 SP6Q3SY56 376 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 COLCA1Q6ZS62 124 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 P4HA3Q7Z4N8 544 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 TMEM56Q96MV1 263 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 CLCF1Q9UBD9 225 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 TMEM56-RWDD3S4R434 201 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms