RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ALX4Q9H161 411 aaPredicted RBP14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 TRIP12Q14669 1992 aaPredicted RBP14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 FAM78BQ5VT40 261 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 PRNDQ9UKY0 176 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 SPINK4O60575 86 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 HTR1DP28221 377 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 BRS3P32247 399 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 RNF151Q2KHN1 245 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 SLC25A40Q8TBP6 338 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 ZPLD1Q8TCW7 415 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 ANAPC16Q96DE5 110 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 FAM27BQ5VT28 67 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 RNF122Q9H9V4 155 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 TEX50A0A1B0GTY4 177 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 A0A1W2PNV4 684 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 TTRP02766 147 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 KIR3DL2P43630 455 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 LIMS1P48059 325 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 EFNB2P52799 333 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 NANOS3P60323 173 aaKnown RBP14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 EWSR1Q01844 656 aaKnown RBP eCLIP14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF385AQ96PM9 386 aaKnown RBP14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 SEC11CQ9BY50 192 aa14.46□□□□□ -0.09
PCDHA1-203ENST00000504120 B4DEV8 164 aa14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 AGFG2O95081 481 aa14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 CRYBA1P05813 215 aa14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 ADAD2Q8NCV1 583 aaKnown RBP14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 PRSS3P2Q8NHM4 247 aa14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 MS4A10Q96PG2 267 aa14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 SLC7A10Q9NS82 523 aa14.46□□□□□ -0.1
PCDHA1-203ENST00000504120 MS4A18H0YCH9 400 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 FSTP19883 344 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 MGAT2Q10469 447 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 MS4A18Q3C1V0 323 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 LYRM2Q9NU23 88 aaPredicted RBP14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 VAX2Q9UIW0 290 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 LEUTXA8MZ59 168 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 SNCGO76070 127 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 IFI6P09912 130 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 LGALSLQ3ZCW2 172 aaPredicted RBP14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 COX19Q49B96 90 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 OR1B1Q8NGR6 318 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 KLHDC2Q9Y2U9 406 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 A0A0U1RQV5 110 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 C11orf94C9JXX5 98 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 AWAT1Q58HT5 328 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 LINC00052Q96N35 136 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 IFT22Q9H7X7 185 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 LYZL2Q7Z4W2 148 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 FAM219AQ8IW50 185 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 OR2T10Q8NGZ9 312 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 MS4A5Q9H3V2 200 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 PARP14Q460N5 1801 aa14.45□□□□□ -0.1
PCDHA1-203ENST00000504120 A0A1W2PPC1 479 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 NKX2-6A6NCS4 301 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 PATE3B3GLJ2 98 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 ZFP36L2P47974 494 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 ZNF345Q14585 488 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 GABRA6Q16445 453 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 SLC23A3Q6PIS1 610 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 C1orf174Q8IYL3 243 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 RAB33BQ9H082 229 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 PIPOXQ9P0Z9 390 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 LYPD8Q6UX82 237 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 TCTEX1D1Q8N7M0 179 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 C1RLQ9NZP8 487 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 SIRT4Q9Y6E7 314 aaPredicted RBP14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 LGALS7P47929 136 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 MRGPRFQ96AM1 343 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 GPX7Q96SL4 187 aaPredicted RBP14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 TTTY12Q9BZ98 90 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 PPP1R3EQ9H7J1 279 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 CDX4O14627 284 aaPredicted RBP14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 SPINK2P20155 84 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 RBM11P57052 281 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 PMS2CLQ68D20 193 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 SSX8Q7RTT4 187 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 TGIF2LYQ8IUE0 185 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 TGIF2LXQ8IUE1 241 aa14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 NFAM1Q8NET5 270 aaPredicted RBP14.44□□□□□ -0.1
PCDHA1-203ENST00000504120 C7orf66A4D0T2 115 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 TCAPO15273 167 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 TSPAN2O60636 221 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 CCKARP32238 428 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 MESP2Q0VG99 397 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 TMEM183BQ1AE95 376 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 MDP1Q86V88 176 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 SLC22A18ASQ8N1D0 253 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 PRSS50Q9UI38 385 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 MRPS18BQ9Y676 258 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 ZNFX1Q9P2E3 1918 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 GREM1O60565 184 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 OR10G8Q8NGN5 311 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 CDRT15L2A8MXV6 281 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 SEC11BP0C7V7 166 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 SFTPA2Q8IWL1 248 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 HEXA-AS1Q9H8Q6 139 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 PARP11Q9NR21 331 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 KLK13Q9UKR3 277 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 VSIG4Q9Y279 399 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms