RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GRB2P62993 217 aaKnown RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC35A2P78381 396 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 CDK5Q00535 292 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 C1DQ13901 141 aaKnown RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 EDDM3AQ14507 147 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF235Q14590 738 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 LRRC75BQ2VPJ9 315 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 DEFB116Q30KQ4 102 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 UBE2NLQ5JXB2 153 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 HIST2H3PS2Q5TEC6 136 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 C1orf195Q5TG92 126 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 HACD4Q5VWC8 232 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 DNAJC24Q6P3W2 148 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 CEMP1Q6PRD7 247 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 NCCRP1Q6ZVX7 275 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 GALNT10Q86SR1 603 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC51BQ86UW2 128 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 LRRC25Q8N386 305 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC25A45Q8N413 288 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 DRAM1Q8N682 238 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 CLDN22Q8N7P3 220 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC35G3Q8N808 338 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF680Q8NEM1 530 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 PXT1Q8NFP0 134 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR4M2Q8NGB6 313 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR6K3Q8NGY3 331 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR1P1Q8NH06 330 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR10D3Q8NH80 312 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR5K1Q8NHB7 308 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 MFSD8Q8NHS3 518 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 TEX47Q8TBZ9 253 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC37A2Q8TED4 501 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 ORAOV1Q8WV07 137 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 GHSRQ92847 366 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 EXOSC8Q96B26 276 aaKnown RBP1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 STARD4Q96DR4 205 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 BMFQ96LC9 184 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SPACA5Q96QH8 159 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR2A7Q96R45 310 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR4K3Q96R72 315 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 PHB2Q99623 299 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF649Q9BS31 505 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 TIPINQ9BVW5 301 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 PECRQ9BY49 303 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 TLNRD1Q9H1K6 362 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 UBQLN4Q9NRR5 601 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 PARVAQ9NVD7 372 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 TAS2R5Q9NYW4 299 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 GLS2Q9UI32 602 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 DKKL1Q9UK85 242 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 PSG11Q9UQ72 335 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 POLR1DQ9Y2S0 133 aa1.51□□□□□ -2.17
HMGB1P35-201ENST00000503360 SNAPC4Q5SXM2 1469 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 EIF3AQ14152 1382 aaKnown RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CARMIL3Q8ND23 1372 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ARID1AO14497 2285 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGLV1-50A0A075B6I6 118 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGKV1-27A0A075B6S5 117 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TRAV8-3A0A0A6YYJ7 113 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGHV1OR15-9A0A0B4J2B8 117 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 A0A0G2JMP0 313 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CENPVL3A0A0U1RRI6 287 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 A0A0X1KG70 313 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 MYBPHLA2RUH7 354 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 SMIM9A6NGZ8 99 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 C9JQL5 133 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 K7EPK0 472 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 PSMD12O00232 456 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 GYG2O15488 501 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CHST10O43529 356 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 FOXH1O75593 365 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 SERPINB7O75635 380 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CIAO1O76071 339 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGHV3-11P01762 117 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TLX1NBP0CAT3 122 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 MIPP30301 263 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC6A1P30531 599 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ADORA1P30542 326 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CCR7P32248 378 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 POLR2IP36954 125 aaKnown RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 MNAT1P51948 309 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 H2BFSP57053 126 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 ARPC4P59998 168 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 PFN3P60673 137 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 RAB5BP61020 215 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 DAD1P61803 113 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 PPP1CAP62136 330 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 MEF2CQ06413 473 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 KRR1Q13601 381 aaKnown RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 EBI3Q14213 229 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 POU6F1Q14863 301 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 EBPQ15125 230 aaKnown RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 TAF1AQ15573 450 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC9A3R2Q15599 337 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 BATFQ16520 125 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 CLLU1OSQ5K130 101 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 N4BP2L1Q5TBK1 243 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 GUSBP11Q6P575 273 aa1.5□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGFL3Q6UXB1 125 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms