RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FAM71E1Q6IPT2 247 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 UGT2A3Q6UWM9 527 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 CLEC19AQ6UXS0 136 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 BBS7Q8IWZ6 715 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 SPICQ8N5J4 248 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 CCNYL1Q8N7R7 359 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR4K2Q8NGD2 314 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 FRZBQ92765 325 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 SDHCQ99643 169 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 MED10Q9BTT4 135 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 NDEL1Q9GZM8 345 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 NXF2Q9GZY0 626 aaKnown RBP3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 MTCH2Q9Y6C9 303 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 TRIP11Q15643 1979 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 COL4A6Q14031 1691 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 DMXL1Q9Y485 3027 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 PIEZO1Q92508 2521 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 DOCK6Q96HP0 2047 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 CCNKO75909 580 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 MRPL3P09001 348 aaKnown RBP3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF286BP0CG31 522 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 UGT2B10P36537 528 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 TUFMP49411 452 aaKnown RBP3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 TRDNQ13061 729 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 PMS2P3Q13401 168 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 MAPRE2Q15555 327 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZBTB6Q15916 424 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 CEACAM16Q2WEN9 425 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 TMEM25Q86YD3 366 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF695Q8IW36 515 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 SLC25A29Q8N8R3 303 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 NECAP1Q8NC96 275 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR2M7Q8NG81 312 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR4K17Q8NGC6 315 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR5M1Q8NGP8 315 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR9A2Q8NGT5 310 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 PPTC7Q8NI37 304 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 PHOSPHO2Q8TCD6 241 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 C17orf50Q8WW18 174 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR5P2Q8WZ92 322 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 HGDQ93099 445 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 CPNE4Q96A23 557 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 RNF157Q96PX1 679 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 RNF5Q99942 180 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 METTL8Q9H825 291 aaKnown RBP3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 ABCB9Q9NP78 766 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 SIRT7Q9NRC8 400 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 C21orf62Q9NYP8 219 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 DNAJC27Q9NZQ0 273 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 STX18Q9P2W9 335 aaKnown RBP3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 USH1CQ9Y6N9 552 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 TECTAO75443 2155 aa3.26□□□□□ -1.89
HMGB1P3-201ENST00000502802 A0A0G2JMP0 313 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 A0A0X1KG70 313 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 GOLGA8IPA6NC78 632 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 CDIPTO14735 213 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SHOX2O60902 331 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SCN2BO60939 215 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR4Q2P0C623 313 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SMIM10L2AP0DMW4 78 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SMIM10L2BP0DMW5 78 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 HLA-GP17693 338 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SYT1P21579 422 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 RPA3P35244 121 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 XKP51811 444 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 MAP3K7CLP57077 242 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 RPL10AP62906 217 aaKnown RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 CD164Q04900 197 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SLAMF1Q13291 335 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 PIGHQ14442 188 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 DMC1Q14565 340 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 TRAM1Q15629 374 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 TRIP13Q15645 432 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 MRPL52Q86TS9 123 aaKnown RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 RNF10Q8N5U6 811 aaKnown RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF461Q8TAF7 563 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 NELFBQ8WX92 580 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZMYND19Q96E35 227 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR10C1Q96KK4 312 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 QKIQ96PU8 341 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SPACA5Q96QH8 159 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 DOK1Q99704 481 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 MRPL20Q9BYC9 149 aaKnown RBP3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 TBL1XR1Q9BZK7 514 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 SPTBN4Q9H254 2564 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 MYO15AQ9UKN7 3530 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZDBF2Q9HCK1 2354 aa3.25□□□□□ -1.89
HMGB1P3-201ENST00000502802 KMT2EQ8IZD2 1858 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 DMDP11532 3685 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 UPK1AO00322 258 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 DHRS3O75911 302 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 RCBTB2O95199 551 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 TNFAIP8O95379 198 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 RLN2P04090 185 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 GP1BAP07359 652 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 MUC1P15941 1255 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 TAC1P20366 129 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms