RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 HOXA5P20719 270 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 HOXA6P31267 233 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 TMEM50BP56557 158 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 TAS2R60P59551 318 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 ZP4Q12836 540 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 OR5I1Q13606 314 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 C16orf82Q7Z2V1 217 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 OR5AS1Q8N127 324 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 MRPL30Q8TCC3 161 aaKnown RBP15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 TIMD4Q96H15 378 aa15.1■□□□□ 0.01
HMGXB3-201ENST00000502717 A0A1B0GU03 582 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 TRGC1P0CF51 173 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 PGA4P0DJD7 388 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 PGA5P0DJD9 388 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 GLIPR1P48060 266 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 DSCR4P56555 118 aaPredicted RBP15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 ALKBH3Q96Q83 286 aaPredicted RBP15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 C11orf94C9JXX5 98 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 OR10G8Q8NGN5 311 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 ABHD14BQ96IU4 210 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 TBX15Q96SF7 602 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 DDA1Q9BW61 102 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 SPTBP11277 2137 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 CBR3O75828 277 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 EDDM3AQ14507 147 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 COL5A1-AS1Q5SY13 56 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 ZNF774Q6NX45 483 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 ZNF596Q8TC21 504 aa15.09■□□□□ 0.01
HMGXB3-201ENST00000502717 SELEP16581 610 aa15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 SRSF5Q13243 272 aaKnown RBP15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 TGIF1Q15583 401 aa15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 VHLLQ6RSH7 139 aa15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 PTPMT1Q8WUK0 201 aaPredicted RBP15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 RARRES2Q99969 163 aa15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 PDCD11Q14690 1871 aaKnown RBP15.08■□□□□ 0.01
HMGXB3-201ENST00000502717 IGHV5-51A0A0C4DH38 117 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 PMS2P1A4D2B8 440 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 F8VVB4 439 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 F8VWA3 439 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 ZNF205O95201 554 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 RPEL1Q2QD12 228 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 ETFRF1Q6IPR1 90 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 TRAV17A0A0B4J275 112 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 OR10J4P0C629 311 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 EDDM3BP56851 147 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 GAMTQ14353 236 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 EDARADDQ8WWZ3 215 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 SLC35E1Q96K37 410 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 PILRAQ9UKJ1 303 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 ASCC3Q8N3C0 2202 aaKnown RBP15.08■□□□□ 0
HMGXB3-201ENST00000502717 SPAG17Q6Q759 2223 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 TRAV34A0A0B4J273 112 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 CHEK1O14757 476 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 FOLR2P14207 255 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 RPS23P62266 143 aaKnown RBP15.08■□□□□ 0
HMGXB3-201ENST00000502717 RUNX1Q01196 453 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 MYPOPQ86VE0 399 aaPredicted RBP15.08■□□□□ 0
HMGXB3-201ENST00000502717 P2RX4Q99571 388 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 TUBD1Q9UJT1 453 aa15.08■□□□□ 0
HMGXB3-201ENST00000502717 AQP7O14520 342 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 ANK1P16157 1881 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 PNLIPP16233 465 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 MDKP21741 143 aaPredicted RBP15.07■□□□□ 0
HMGXB3-201ENST00000502717 PLAC9Q5JTB6 97 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 SFTPA1Q8IWL2 248 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 HDHD3Q9BSH5 251 aaPredicted RBP15.07■□□□□ 0
HMGXB3-201ENST00000502717 SIP14410 1827 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 BRCA1P38398 1863 aaKnown RBP15.07■□□□□ 0
HMGXB3-201ENST00000502717 CT45A6P0DMU7 189 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 CT45A5P0DMU8 189 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 CT45A7P0DMV0 189 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 GNG3P63215 75 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 CT45A1Q5HYN5 189 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 GFRALQ6UXV0 394 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 LURAP1LQ8IV03 231 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 CT45A3Q8NHU0 189 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 CTHRC1Q96CG8 243 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 LANCL2Q9NS86 450 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 COA4Q9NYJ1 87 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 IGKV1D-42A0A075B6H8 117 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 CTXND1A0A1B0GTU2 59 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 A0A1W2PP11 408 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 TMEM14DPA8MWL7 114 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 SOX15O60248 233 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 SMIM10L1P0DMW3 83 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 ZNF32P17041 273 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 PAFAH1B2P68402 229 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 SMIM10Q96HG1 83 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 GPR27Q9NS67 375 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 FCGR3AP08637 254 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 HIKESHIQ53FT3 197 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 EGLN1Q9GZT9 426 aa15.07■□□□□ 0
HMGXB3-201ENST00000502717 A0A096LPE4 126 aa15.06■□□□□ 0
HMGXB3-201ENST00000502717 A0A1W2PPZ6 126 aa15.06■□□□□ 0
HMGXB3-201ENST00000502717 J3QR89 54 aa15.06■□□□□ 0
HMGXB3-201ENST00000502717 PDE6DO43924 150 aa15.06■□□□□ 0
HMGXB3-201ENST00000502717 LMX1BO60663 402 aa15.06■□□□□ 0
HMGXB3-201ENST00000502717 COL9A1P20849 921 aa15.06■□□□□ 0
HMGXB3-201ENST00000502717 Q8IYB0 196 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms