RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 KLK11Q9UBX7 282 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 ODAMA1E959 279 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 LANCL1O43813 399 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 NAPSAO96009 420 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 MT-ND4P03905 459 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 RCC1P18754 421 aaPredicted RBP16.05■□□□□ 0.16
USP39-218ENST00000493829 PTBP1P26599 531 aaKnown RBP eCLIP16.05■□□□□ 0.16
USP39-218ENST00000493829 SLC35E4Q6ICL7 350 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 MRGPRDQ8TDS7 321 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 GPX8Q8TED1 209 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 RAB39BQ96DA2 213 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 LPAR2Q9HBW0 351 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 RABL2AQ9UBK7 228 aaPredicted RBP16.05■□□□□ 0.16
USP39-218ENST00000493829 RABL2BQ9UNT1 228 aa16.05■□□□□ 0.16
USP39-218ENST00000493829 GABARAPH6UMI1 98 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 CTDSPLO15194 276 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 USF1P22415 310 aaPredicted RBP16.04■□□□□ 0.16
USP39-218ENST00000493829 LCN2P80188 198 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 BAK1Q16611 211 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 OR52W1Q6IF63 320 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 BTN2A1Q7KYR7 527 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 PRR18Q8N4B5 295 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 OR13A1Q8NGR1 328 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 SCPEP1Q9HB40 452 aa16.04■□□□□ 0.16
USP39-218ENST00000493829 MAP1AP78559 2803 aaPredicted RBP16.03■□□□□ 0.16
USP39-218ENST00000493829 VPS13CQ709C8 3753 aa16.03■□□□□ 0.16
USP39-218ENST00000493829 A0A1W2PQ09 198 aa16.03■□□□□ 0.16
USP39-218ENST00000493829 CA11O75493 328 aa16.03■□□□□ 0.16
USP39-218ENST00000493829 RPL31P62899 125 aaKnown RBP16.03■□□□□ 0.16
USP39-218ENST00000493829 MRPS10P82664 201 aaKnown RBP16.03■□□□□ 0.16
USP39-218ENST00000493829 FOXC2Q99958 501 aa16.03■□□□□ 0.16
USP39-218ENST00000493829 THAP7Q9BT49 309 aaPredicted RBP16.03■□□□□ 0.16
USP39-218ENST00000493829 IGKV1D-8A0A087WSZ0 117 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 FAM157AC9JC47 383 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 TPPPO94811 219 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 ZFP36P26651 326 aaKnown RBP16.02■□□□□ 0.16
USP39-218ENST00000493829 PPP5CP53041 499 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 TRIQKQ629K1 86 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 PRSS57Q6UWY2 283 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 TCF23Q7RTU1 214 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 GDPD1Q8N9F7 314 aa16.02■□□□□ 0.16
USP39-218ENST00000493829 FUOMA2VDF0 154 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 C22orf46C9J442 243 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 H7C1Q1 480 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 GSTZ1O43708 216 aaPredicted RBP16.02■□□□□ 0.15
USP39-218ENST00000493829 CD40LGP29965 261 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 SSTR5P35346 364 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 GDNFP39905 211 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 ZNF273Q14593 569 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 TRIM63Q969Q1 353 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 Q9N2K0 584 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 ABCB10Q9NRK6 738 aa16.02■□□□□ 0.15
USP39-218ENST00000493829 A0A096LNT2 108 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 LINC00854A0A1B0GVQ3 168 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 KIAA1324LA8MWY0 1029 aaPredicted RBP16.01■□□□□ 0.15
USP39-218ENST00000493829 SULT1C2O00338 296 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 ORC5O43913 435 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 RBBP9O75884 186 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 HEXAP06865 529 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 DTYMKP23919 212 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 ERP29P30040 261 aaKnown RBP16.01■□□□□ 0.15
USP39-218ENST00000493829 NPY4RP50391 375 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 GAPTQ8N292 157 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 SNAPC3Q92966 411 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 OCSTAMPQ9BR26 566 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 REG4Q9BYZ8 158 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 RIMS4Q9H426 269 aaPredicted RBP16.01■□□□□ 0.15
USP39-218ENST00000493829 MTFP1Q9UDX5 166 aa16.01■□□□□ 0.15
USP39-218ENST00000493829 TRGV10A0A0A0MS01 117 aa16■□□□□ 0.15
USP39-218ENST00000493829 hADV38S2A0JD32 116 aa16■□□□□ 0.15
USP39-218ENST00000493829 IL7P13232 177 aa16■□□□□ 0.15
USP39-218ENST00000493829 CCL3L1P16619 93 aa16■□□□□ 0.15
USP39-218ENST00000493829 HLA-DMAP28067 261 aa16■□□□□ 0.15
USP39-218ENST00000493829 RCVRNP35243 200 aa16■□□□□ 0.15
USP39-218ENST00000493829 CBX5P45973 191 aa16■□□□□ 0.15
USP39-218ENST00000493829 PAX5Q02548 391 aa16■□□□□ 0.15
USP39-218ENST00000493829 LTC4SQ16873 150 aa16■□□□□ 0.15
USP39-218ENST00000493829 HOGA1Q86XE5 327 aa16■□□□□ 0.15
USP39-218ENST00000493829 BEST4Q8NFU0 473 aa16■□□□□ 0.15
USP39-218ENST00000493829 RPUSD1Q9UJJ7 312 aaKnown RBP16■□□□□ 0.15
USP39-218ENST00000493829 LOC105371242A0A075B767 164 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 INPP1P49441 399 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 ACTBP60709 375 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 ACTG1P63261 375 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 HLA-DRB3P79483 266 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 ZNF57Q68EA5 555 aaPredicted RBP15.99■□□□□ 0.15
USP39-218ENST00000493829 TMEM200BQ69YZ2 307 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 MOB1BQ7L9L4 216 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 TAF9BQ9HBM6 251 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 ZNF286AQ9HBT8 521 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 OR6C3Q9NZP0 311 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 CCDC168Q8NDH2 2452 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 ABCA2Q9BZC7 2435 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 FLNBO75369 2602 aaKnown RBP15.99■□□□□ 0.15
USP39-218ENST00000493829 TRBV6-6A0A0A6YYG2 114 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 C12orf77C9JDV5 145 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 SCTP09683 121 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 OMGP23515 440 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 ZNF880Q6PDB4 577 aa15.99■□□□□ 0.15
USP39-218ENST00000493829 OR1L1Q8NH94 360 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms