RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, human

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-218	ENST00000493456	GAPDH	P04406	335 aa	Known RBP	13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	ISG15	P05161	165 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	DAP	P51397	102 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	ISL1	P61371	349 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	PAX5	Q02548	391 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	CDK5R1	Q15078	307 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	C12orf73	Q69YU5	71 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	ZNF429	Q86V71	674 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	OR5D18	Q8NGL1	313 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	NSL1	Q96IY1	281 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	IL4I1	Q96RQ9	567 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	BARHL1	Q9BZE3	327 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	KIF25	Q9UIL4	384 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456	ZNF580	Q9UK33	172 aa		13.79	□□□□□ -0.2
NUP50-218	ENST00000493456		H0YJX3	145 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	HSPB6	O14558	160 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	FRMD6-AS1	P0C7T7	363 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	DBT	P11182	482 aa	Known RBP	13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	PSMB8	P28062	276 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	HTR1F	P30939	366 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	LTC4S	Q16873	150 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	PAN3	Q58A45	887 aa	Known RBP	13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	OR10H4	Q8NGA5	316 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	MYOZ3	Q8TDC0	251 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	SPACA5	Q96QH8	159 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	RASL11B	Q9BPW5	248 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	CHCHD3	Q9NX63	227 aa	Known RBP	13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	GNG8	Q9UK08	70 aa		13.78	□□□□□ -0.2
NUP50-218	ENST00000493456	ZAR1L	A6NP61	321 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	FKBP6	O75344	327 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	APOL3	O95236	402 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	OR5H8	P0DN80	308 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	CALB2	P22676	271 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	KCNJ3	P48549	501 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	MTNR1B	P49286	362 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	OR8H1	Q8NGG4	311 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	OR2G2	Q8NGZ5	317 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	MRGPRD	Q8TDS7	321 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	RNFT2	Q96EX2	444 aa		13.77	□□□□□ -0.21
NUP50-218	ENST00000493456	IGHV3-72	A0A0B4J1Y9	119 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	MOS	P00540	346 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	IGF1	P05019	195 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	CD1B	P29016	333 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	SSTR5	P35346	364 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	ATP6V1E1	P36543	226 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	REG1B	P48304	166 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	RUNX1	Q01196	453 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	ZNF616	Q08AN1	781 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	OVCH2	Q7RTZ1	564 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	OR13C9	Q8NGT0	318 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	RFESD	Q8TAC1	157 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	RNF166	Q96A37	237 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	UBE2E2	Q96LR5	201 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	S1PR3	Q99500	378 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	CHCHD6	Q9BRQ6	235 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	ISYNA1	Q9NPH2	558 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	PLSCR3	Q9NRY6	295 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	MYRF	Q9Y2G1	1151 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	SORL1	Q92673	2214 aa		13.76	□□□□□ -0.21
NUP50-218	ENST00000493456	TRAV24	A0A0B4J272	114 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456		A0A1W2PPE3	182 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456		I3L521	148 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	HCK	P08631	526 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	TMEM225B	P0DP42	221 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	EPHA2	P29317	976 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	SOX6	P35712	828 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	TMED1	Q13445	227 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	IL13RA2	Q14627	380 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	TP53I3	Q53FA7	332 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	ZFAND6	Q6FIF0	208 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	ELP2	Q6IA86	826 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	FAM71E2	Q8N5Q1	922 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	LINC00311	Q8N616	119 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	TMEM104	Q8NE00	496 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	OR1N2	Q8NGR9	330 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	OR13C3	Q8NGS6	347 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	CNIH3	Q8TBE1	160 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	UTP4	Q969X6	686 aa	Known RBP	13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	ISOC1	Q96CN7	298 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	KCTD7	Q96MP8	289 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	HSPB9	Q9BQS6	159 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	FRRS1L	Q9P0K9	344 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	ENOPH1	Q9UHY7	261 aa		13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	PLEC	Q15149	4684 aa	Known RBP	13.75	□□□□□ -0.21
NUP50-218	ENST00000493456	IL3RA	P26951	378 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	ZP1	P60852	638 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	ZNF85	Q03923	595 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	ASPHD1	Q5U4P2	390 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	FDX2	Q6P4F2	183 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	TMEM65	Q6PI78	240 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	SPATA24	Q86W54	205 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	C8orf31	Q8N9H6	132 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	ZCCHC4	Q9H5U6	513 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	FAM118A	Q9NWS6	357 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	VSIG4	Q9Y279	399 aa		13.74	□□□□□ -0.21
NUP50-218	ENST00000493456	OVOL1	O14753	267 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	TXNL1	O43396	289 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	MITF	O75030	526 aa	Predicted RBP	13.73	□□□□□ -0.21

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