RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 COX5BP10606 129 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 AGAP20933 346 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 CCL20P78556 96 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 ID3Q02535 119 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 OR2M7Q8NG81 312 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 THOC3Q96J01 351 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 RARRES2Q99969 163 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 KCNJ16Q9NPI9 418 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 ATP23Q9Y6H3 246 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 KIR2DS1A0A191URI9 304 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 DUXBA0A1W2PPF3 345 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 C5orf52A6NGY3 159 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 HSD17B6O14756 317 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 SYNGR1O43759 233 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 NGFP01138 241 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 KIR2DS4P43632 304 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 CTAG1AP78358 180 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 KIR2DS1Q14954 304 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 FAM173AQ9BQD7 235 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 SLC25A31Q9H0C2 315 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF552Q9H707 407 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 TRAPPC2LH3BP13 241 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 GPR37O15354 613 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 VDAC1P21796 283 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 ACP1P24666 158 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 RHEBQ15382 184 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 SPSB3Q6PJ21 355 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 MKXQ8IYA7 352 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 OR5C1Q8NGR4 320 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 CD300LFQ8TDQ1 290 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 HES7Q9BYE0 225 aa13.79□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 CDRT15L2A8MXV6 281 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 SULT1A1P50225 295 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 VAMP2P63027 116 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 PCSK4Q6UW60 755 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF561Q8N587 486 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 ZFP62Q8NB50 900 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 MRPL30Q8TCC3 161 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 NEK7Q8TDX7 302 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 SMOC1Q9H4F8 434 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 ACAA1P09110 424 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 CTXN2P0C2S0 81 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 DYNLT3P51808 116 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 KRBOX4Q5JUW0 171 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 OR8G5Q8NG78 346 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 OR5A2Q8NGI9 324 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 OR5D13Q8NGL4 314 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 POM121L2Q96KW2 1035 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 SMDT1Q9H4I9 107 aa13.78□□□□□ -0.2
SEMA4D-220ENST00000492386 H0Y980 276 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 CST7O76096 145 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 ARG1P05089 322 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 MMP9P14780 707 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 RAB5AP20339 215 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 EPHA1P21709 976 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 ZXDAP98168 799 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 EIF2S3LQ2VIR3 472 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 SUMF2Q8NBJ7 301 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 GTF3AQ92664 365 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 TAAR3PQ9P1P4 343 aa13.77□□□□□ -0.21
SEMA4D-220ENST00000492386 hCG_1809904A0A1W2PP81 198 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 A0A1W2PPE3 182 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 A0A1W2PR64 198 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 A0A1W2PRV1 198 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 CD300LBA8K4G0 201 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 UBE2CO00762 179 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 TNFSF12O43508 249 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 PGLYRP1O75594 196 aaPredicted RBP13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 OR5P3Q8WZ94 311 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 ZNF488Q96MN9 340 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 SPRY4Q9C004 299 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 RNF115Q9Y4L5 304 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 A0A1W2PPE2 198 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 RBFOX3A6NFN3 312 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 CHST1O43916 411 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 LILRA1O75019 489 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 NXPH3O95157 252 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 SLC34A2O95436 690 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 SYNGR4O95473 234 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 PAX9P55771 341 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 RAB1AP62820 205 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 BAXQ07812 192 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 SOHLH1Q5JUK2 328 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 CMTM1Q8IZ96 169 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 IL22RA1Q8N6P7 574 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 B4GALT7Q9UBV7 327 aa13.76□□□□□ -0.21
SEMA4D-220ENST00000492386 FAM166BA8MTA8 275 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 SLC33A1O00400 549 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 HSPA12AO43301 675 aa13.75□□□□□ -0.21
SEMA4D-220ENST00000492386 SPINK2P20155 84 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms