RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 MTCH1Q9NZJ7 389 aa5.42□□□□□ -1.54
SF3A3-208ENST00000489537 POU2F3Q9UKI9 436 aa5.42□□□□□ -1.54
SF3A3-208ENST00000489537 MAB21L2Q9Y586 359 aa5.42□□□□□ -1.54
SF3A3-208ENST00000489537 FAM215AQ9Y5M1 114 aa5.42□□□□□ -1.54
SF3A3-208ENST00000489537 PHF3Q92576 2039 aaKnown RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 NCKAP5O14513 1909 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 IGKV1-12A0A0C4DH73 117 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 A0A1W2PP11 408 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 C5orf51A6NDU8 294 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF503-AS2A6NEH8 195 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 WIPF3A6NGB9 483 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 OR2AT4A6NND4 320 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 RP2O75695 350 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 LY86O95711 162 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PTBP3O95758 552 aaKnown RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 KNG1P01042 644 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 IGKV1D-12P01611 117 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 ADH4P08319 380 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 WNT2P09544 360 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 VSIG10L2P0DP72 767 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF44P15621 663 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 TNFRSF1AP19438 455 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 CXCL3P19876 107 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 BCL3P20749 454 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 LMO1P25800 156 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PSMB6P28072 239 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 S100A11P31949 105 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 CD200P41217 278 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 NPY4RP50391 375 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF81P51508 661 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 TDGF1P3P51864 188 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 ERVK11-1P61568 191 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 ID3Q02535 119 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 TLE1Q04724 770 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PSG7Q13046 419 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PPP1R1AQ13522 171 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PIGYQ3MUY2 71 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PAN3Q58A45 887 aaKnown RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 SIGIRRQ6IA17 410 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 SLC22A25Q6T423 547 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 LGI3Q8N145 548 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 C9orf62Q8N4C0 152 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 LRTM2Q8N967 370 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 SCCPDHQ8NBX0 429 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 BHLHE23Q8NDY6 225 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 OR5D13Q8NGL4 314 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 OR11L1Q8NGX0 322 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 OR10J5Q8NHC4 309 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 NINJ1Q92982 152 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 IL22RA2Q969J5 263 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 PHYHIPLQ96FC7 376 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 NKX3-1Q99801 234 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 SULT4A1Q9BR01 284 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 DPCDQ9BVM2 203 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 OPN3Q9H1Y3 402 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 METTL8Q9H825 291 aaKnown RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 FN3KRPQ9HA64 309 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 BEX1Q9HBH7 125 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 Q9N2K0 584 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 CA10Q9NS85 328 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 FAM212BQ9NTI7 297 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-208ENST00000489537 TAAR3PQ9P1P4 343 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 DNAJB11Q9UBS4 358 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 NDRG3Q9UGV2 375 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 VSIG4Q9Y279 399 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 TMED3Q9Y3Q3 217 aa5.41□□□□□ -1.54
SF3A3-208ENST00000489537 IGLV3-9A0A075B6K5 115 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 IGHV1-18A0A0C4DH31 117 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 TMEM238LA0A1B0GVL6 79 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 KANTRA0A1W2PQU2 76 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 TMEM30CPA0ZSE6 113 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CLEC18AA5D8T8 446 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 OR5H14A6NHG9 310 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CRYM-AS1A6NIL9 109 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 A6NLC8 198 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 LRRC30A6NM36 301 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 DBX1A6NMT0 343 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 A8MV72 311 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 EEF1E1-BLOC1S5C9J1V9 151 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 GPR31O00270 319 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 TAAR5O14804 337 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 SCAF4O95104 1147 aaKnown RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CDS2O95674 445 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 PPYP01298 95 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 PVALBP20472 110 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 GLRA1P23415 457 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 FCGR2CP31995 323 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 UBA52P62987 128 aaKnown RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 FOXF2Q12947 444 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF154Q13106 437 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 AADACL3Q5VUY0 350 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF660Q6AZW8 331 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 SLC35E4Q6ICL7 350 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 C11orf87Q6NUJ2 197 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF880Q6PDB4 577 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF474Q6S9Z5 364 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-208ENST00000489537 CLEC18BQ6UXF7 455 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ACOT7LQ6ZUV0 252 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 SEM1Q6ZVN7 128 aa5.4□□□□□ -1.54
SF3A3-208ENST00000489537 ZNF546Q86UE3 836 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms