RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZNF728P0DKX0 622 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 Q8N7P7 452 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 ZNF565Q8N9K5 539 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 ARHGAP5-AS1Q96IT6 56 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 ZNF714Q96N38 554 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 FAAP24Q9BTP7 215 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 ATG5Q9H1Y0 275 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 ZANQ9Y493 2812 aa15.92■□□□□ 0.14
PCOLCE-208ENST00000487172 hCG_1809904A0A1W2PP81 198 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 A0A1W2PPE2 198 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 A0A1W2PR64 198 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 A0A1W2PRV1 198 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 UBE2QL1A1L167 161 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 CGB3P0DN86 165 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 CGB7P0DN87 165 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 CCL3L1P16619 93 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 HNF1AP20823 631 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 PRTN3P24158 256 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 SOX6P35712 828 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 ARL6IP1Q15041 203 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 MOGAT2Q3SYC2 334 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 PLAC9Q5JTB6 97 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 DYNC2LI1Q8TCX1 351 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 AP3S1Q92572 193 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 SLC25A38Q96DW6 304 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 RAB3CQ96E17 227 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 TBX15Q96SF7 602 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 PECRQ9BY49 303 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 ABCG5Q9H222 651 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 ING3Q9NXR8 418 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 RSL24D1Q9UHA3 163 aaKnown RBP15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 CDC42EP3Q9UKI2 254 aa15.91■□□□□ 0.14
PCOLCE-208ENST00000487172 A0A0A6YYH2 397 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 CCDC160A6NGH7 325 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 A6NJ64 397 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 ZNF729A6NN14 1252 aaPredicted RBP15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 POM121CA8CG34 1229 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 INAFM1C9JVW0 142 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 FSHBP01225 129 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 TRAPPC6BQ86SZ2 158 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 NANPQ8TBE9 248 aa15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 RIMS4Q9H426 269 aaPredicted RBP15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 METTL8Q9H825 291 aaKnown RBP15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCOLCE-208ENST00000487172 HIVEP2P31629 2446 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 MFNGO00587 321 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 HIST1H1DP16402 221 aaKnown RBP15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 GZMHP20718 246 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 UBE2NLQ5JXB2 153 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 MZT2AQ6P582 158 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 VMO1Q7Z5L0 202 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 OR13A1Q8NGR1 328 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 DYRK2Q92630 601 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 TNFRSF14Q92956 283 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 CYYR1Q96J86 154 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 PCGF1Q9BSM1 259 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 BEX2Q9BXY8 128 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 GAL3ST2Q9H3Q3 398 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 LINC00574Q9H8X3 128 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 CCDC59Q9P031 241 aaKnown RBP15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 KCNK7Q9Y2U2 307 aa15.89■□□□□ 0.13
PCOLCE-208ENST00000487172 TLN2Q9Y4G6 2542 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 TRBV6-6A0A0A6YYG2 114 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 DPPA5A6NC42 116 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 NAPSAO96009 420 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 ERVFRD-1P60508 538 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 C17orf58Q2M2W7 97 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 KLF17Q5JT82 389 aaPredicted RBP15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 ZNF554Q86TJ5 538 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 LURAP1LQ8IV03 231 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 SAMD12Q8N8I0 201 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 MRPL30Q8TCC3 161 aaKnown RBP15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 PHF21AQ96BD5 680 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 S100A16Q96FQ6 103 aaKnown RBP15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 MBNL3Q9NUK0 354 aaKnown RBP15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 COMMD3Q9UBI1 195 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 AK3Q9UIJ7 227 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 KIAA2026Q5HYC2 2103 aa15.88■□□□□ 0.13
PCOLCE-208ENST00000487172 KBTBD11-OT1A0A1B0GTJ5 212 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 MEX3AA1L020 520 aaKnown RBP15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 SERPINE3A8MV23 424 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 ORC5O43913 435 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 CRLF1O75462 422 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 BPIFB3P59826 476 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 CHRFAM7AQ494W8 412 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 NCR3LG1Q68D85 454 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 TRAT1Q6PIZ9 186 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 HEPN1Q6WQI6 88 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 RTN4RL2Q86UN3 420 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 OR10A7Q8NGE5 316 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 OR4K15Q8NH41 348 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 MRGPRDQ8TDS7 321 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 DGCR14Q96DF8 476 aaKnown RBP15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 DIABLOQ9NR28 239 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 SIRT7Q9NRC8 400 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 TRAPPC2LQ9UL33 140 aa15.87■□□□□ 0.13
PCOLCE-208ENST00000487172 CENPVL3A0A0U1RRI6 287 aa15.86■□□□□ 0.13
PCOLCE-208ENST00000487172 NPIPB11E5RHQ5 1161 aa15.86■□□□□ 0.13
PCOLCE-208ENST00000487172 CLPXO76031 633 aa15.86■□□□□ 0.13
PCOLCE-208ENST00000487172 APOA1P02647 267 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms