RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 KCNJ3P48549 501 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 EFNB2P52799 333 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 GP2P55259 537 aaKnown RBP10.38□□□□□ -0.75
HDAC1-209ENST00000484305 IRF3Q14653 427 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 MED22Q15528 200 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 GLIPR1L1Q6UWM5 242 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 UNQ9370/PRO34162Q6UXP9 181 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 LYPD6Q86Y78 171 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 OR4C13Q8NGP0 309 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 RFESDQ8TAC1 157 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 ZNF596Q8TC21 504 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 MRGPRDQ8TDS7 321 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 KIRREL1Q96J84 757 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 TMED9Q9BVK6 235 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 ANKRD60Q9BZ19 345 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 NPFFR1Q9GZQ6 430 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
HDAC1-209ENST00000484305 CALYQ9NYX4 217 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 DPM3Q9P2X0 92 aa10.38□□□□□ -0.75
HDAC1-209ENST00000484305 H0YHG0 523 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 F2RL2O00254 374 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 MAPK3P27361 379 aaPredicted RBP10.37□□□□□ -0.75
HDAC1-209ENST00000484305 GPR176Q14439 515 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 MPV17LQ2QL34 196 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 HLA-DRB5Q30154 266 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 ACSM3Q53FZ2 586 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 ATAD3CQ5T2N8 411 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 AWAT2Q6E213 333 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 IZUMO2Q6UXV1 221 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 LINC00596Q86U02 117 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 CDH26Q8IXH8 852 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 MS4A15Q8N5U1 240 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 LEAP2Q969E1 77 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 DUSP21Q9H596 190 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 LINC00574Q9H8X3 128 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 ZNF702PQ9H963 129 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 PCDHB16Q9NRJ7 776 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 PITPNC1Q9UKF7 332 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 TPRKBQ9Y3C4 175 aa10.37□□□□□ -0.75
HDAC1-209ENST00000484305 TET2Q6N021 2002 aaPredicted RBP10.36□□□□□ -0.75
HDAC1-209ENST00000484305 FAM90A22PA8MWA6 464 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 LEUTXA8MZ59 168 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 LY6LH3BQJ8 138 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 BUB1B-PAK6H3BSN5 160 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 TOR1AO14656 332 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 TIMM23O14925 209 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 IL1AP01583 271 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 IGHV3-7P01780 117 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 CRHBPP24387 322 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 CD24P25063 80 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 SSTR5P35346 364 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 PRRX1P54821 245 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 RBM39Q14498 530 aaKnown RBP10.36□□□□□ -0.75
HDAC1-209ENST00000484305 HABP2Q14520 560 aaPredicted RBP10.36□□□□□ -0.75
HDAC1-209ENST00000484305 LTC4SQ16873 150 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 NKAIN3Q8N8D7 197 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 TMEM104Q8NE00 496 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 OR9G1Q8NH87 305 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 OR2T6Q8NHC8 308 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 THRSPQ92748 146 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 VCX3BQ9H321 246 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 BANF2Q9H503 90 aa10.36□□□□□ -0.75
HDAC1-209ENST00000484305 VWFP04275 2813 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 RGS10O43665 173 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 CRTAPO75718 401 aaPredicted RBP10.35□□□□□ -0.75
HDAC1-209ENST00000484305 SC5DO75845 299 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 MGMTP16455 207 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 VHLP40337 213 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 GPR50Q13585 617 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 FBLN7Q53RD9 439 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 TPTE2P1Q5T6R2 138 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 LIPKQ5VXJ0 399 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 Q6ZS46 218 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 CEACAM19Q7Z692 300 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 LRRTM1Q86UE6 522 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 Q8N2B8 174 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 MRPS24Q96EL2 167 aaKnown RBP10.35□□□□□ -0.75
HDAC1-209ENST00000484305 CYYR1Q96J86 154 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 UQCC2Q9BRT2 126 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 SELENOIQ9C0D9 397 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 MMP28Q9H239 520 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 PSG11Q9UQ72 335 aa10.35□□□□□ -0.75
HDAC1-209ENST00000484305 TMEM30CPA0ZSE6 113 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 C15orf65H3BRN8 121 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 J3QR06 171 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 M0QZ24 198 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 MT-ND4P03905 459 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 HSMCR30P0CW71 290 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 SRMP19623 302 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 GZMHP20718 246 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 BRS3P32247 399 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 CEACAM3P40198 252 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms