RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SULT1C4O75897 302 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 MOSP00540 346 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 IGF1P05019 195 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 SOX6P35712 828 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 CRISP1P54107 249 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 ISL1P61371 349 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 PAN3Q58A45 887 aaKnown RBP12.51□□□□□ -0.41
DDX56-210ENST00000479440 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 BCDIN3DQ7Z5W3 292 aaKnown RBP12.51□□□□□ -0.41
DDX56-210ENST00000479440 SAXO1Q8IYX7 474 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 S1PR3Q99500 378 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 CHCHD6Q9BRQ6 235 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 BARHL1Q9BZE3 327 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 TRIM64CA6NLI5 447 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 H0YJX3 145 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 SNX3O60493 162 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 APOL3O95236 402 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 HOXB6P17509 224 aaKnown RBP12.5□□□□□ -0.41
DDX56-210ENST00000479440 IL3RAP26951 378 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 ZP1P60852 638 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX56-210ENST00000479440 HSP90B2PQ58FF3 399 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 AADACL4Q5VUY2 407 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 MRGPRDQ8TDS7 321 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 DCUN1D4Q92564 292 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 ASB9Q96DX5 294 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 GNB4Q9HAV0 340 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 CSMD3Q7Z407 3707 aa12.5□□□□□ -0.41
DDX56-210ENST00000479440 A0A1W2PQL4 384 aaPredicted RBP12.49□□□□□ -0.41
DDX56-210ENST00000479440 OR2T7P0C7T2 308 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 DBTP11182 482 aaKnown RBP12.49□□□□□ -0.41
DDX56-210ENST00000479440 PRKACGP22612 351 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 CD1BP29016 333 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 HTR1FP30939 366 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 SSTR5P35346 364 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 GNB1P62873 340 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 PTGES3Q15185 160 aaKnown RBP12.49□□□□□ -0.41
DDX56-210ENST00000479440 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 PRSS35Q8N3Z0 413 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 FAM71E2Q8N5Q1 922 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 RFESDQ8TAC1 157 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 TMEM163Q8TC26 289 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 ST6GALNAC6Q969X2 333 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 FGGYQ96C11 551 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
DDX56-210ENST00000479440 ZNF107Q9UII5 783 aaPredicted RBP12.49□□□□□ -0.41
DDX56-210ENST00000479440 A0A1W2PPE3 182 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 M0R129 80 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 TXNL1O43396 289 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 FAM107AO95990 144 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 MT-ND2P03891 347 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 IGHV4-30-4P0DP06 118 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 KIR3DL2P43630 455 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 KCNJ3P48549 501 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 MTNR1BP49286 362 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 MS4A2Q01362 244 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 PAX5Q02548 391 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 CDK5R1Q15078 307 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 SGPP2Q8IWX5 399 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 RDH10Q8IZV5 341 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 TCEANCQ8N8B7 351 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 RTN4IP1Q8WWV3 396 aaPredicted RBP12.48□□□□□ -0.41
DDX56-210ENST00000479440 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 OR5B12Q96R08 314 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 PLSCR3Q9NRY6 295 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
DDX56-210ENST00000479440 WARS2Q9UGM6 360 aaKnown RBP12.48□□□□□ -0.41
DDX56-210ENST00000479440 DCTN3O75935 186 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 RSBN1Q5VWQ0 802 aaPredicted RBP12.47□□□□□ -0.41
DDX56-210ENST00000479440 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 OR10H4Q8NGA5 316 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 OR13C9Q8NGT0 318 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
DDX56-210ENST00000479440 MBOAT4Q96T53 435 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 GNG8Q9UK08 70 aa12.47□□□□□ -0.41
DDX56-210ENST00000479440 KIAA2026Q5HYC2 2103 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 LINC01619G3V211 115 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 TMEM225BP0DP42 221 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 PPIFP30405 207 aaKnown RBP12.46□□□□□ -0.41
DDX56-210ENST00000479440 IL13RA2Q14627 380 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 ACSM6Q6P461 480 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 C8orf31Q8N9H6 132 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
DDX56-210ENST00000479440 UTP4Q969X6 686 aaKnown RBP12.46□□□□□ -0.41
DDX56-210ENST00000479440 EME1Q96AY2 570 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 KLK15Q9H2R5 256 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 MYRFQ9Y2G1 1151 aa12.46□□□□□ -0.41
DDX56-210ENST00000479440 MRPS28Q9Y2Q9 187 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms