RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 LAMB2P55268 1798 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 TRAV8-7A0A075B6U6 113 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 A0A0U1RQF3 1178 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 HSPB1P04792 205 aaKnown RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 MMP9P14780 707 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 B2MP61769 119 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 SURF2Q15527 256 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 ADAMTSL4Q6UY14 1074 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ROBO4Q8WZ75 1007 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 FGF14Q92915 247 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 C1QTNF4Q9BXJ3 329 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 CFHR5Q9BXR6 569 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 RASL12Q9NYN1 266 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 PLIN4Q96Q06 1357 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 OR11H12B2RN74 326 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 FOLR2P14207 255 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 JUNBP17275 347 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 GALP22466 123 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 HOXA6P31267 233 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 GLIPR1P48060 266 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 RGNQ15493 299 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 TMEM42Q69YG0 159 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 FBXL22Q6P050 247 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 OR11H1Q8NG94 326 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 OR11H2Q8NH07 326 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 PGLYRP4Q96LB8 373 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ZNF2Q9BSG1 426 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 ASCL3Q9NQ33 180 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 A0A0G2JLL6 359 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 HOXC5Q00444 222 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 SRSF1Q07955 248 aaKnown RBP eCLIP4.82□□□□□ -1.64
USF3-202ENST00000478658 CYS1Q717R9 158 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 PRRT2Q7Z6L0 340 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 CHST5Q9GZS9 411 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 C12orf49Q9H741 205 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 METTL1Q9UBP6 276 aaKnown RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 HRH3Q9Y5N1 445 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 R4GMQ9 66 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 V9GYH0 126 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 KCNE1BA0A087WTH5 132 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 PPP6CO00743 305 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 FCN3O75636 299 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 GAGE2EQ4V326 116 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 KHDC1Q4VXA5 237 aaKnown RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 ZNF789Q5FWF6 425 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 PIANPQ8IYJ0 282 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 OR52B4Q8NGK2 314 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 OR13A1Q8NGR1 328 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TSACCQ96A04 125 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 FLYWCH2Q96CP2 140 aaKnown RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 GAGE2DQ9UEU5 116 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 FOXH1O75593 365 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 P2RY2P41231 377 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 SLC10A6Q3KNW5 377 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 C1orf162Q8NEQ5 155 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 KCNS1Q96KK3 526 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ZNF300Q96RE9 604 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 RCE1Q9Y256 329 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 C3P01024 1663 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ANK1P16157 1881 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 A0A1W2PNV4 684 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 SOCS6O14544 535 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 CEACAM4O75871 244 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 KBTBD11O94819 623 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ATP5G2Q06055 141 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ZNF56Q15929 161 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 C1QTNF12Q5T7M4 302 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 RTN4RL2Q86UN3 420 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 NECAP1Q8NC96 275 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ABHD14BQ96IU4 210 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 GLIS2Q9BZE0 524 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 PLAGL1Q9UM63 463 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 GBF1Q92538 1859 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 CASP8AP2Q9UKL3 1982 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 A0A087WV62 115 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 NTN1O95631 604 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 CD27P26842 260 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 RPS4XP62701 263 aaKnown RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 KRTCAP3Q53RY4 240 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 MRPL2Q5T653 305 aaKnown RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 C1orf210Q8IVY1 113 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 CELF2-AS1Q8N7Q2 184 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ABHD17AQ96GS6 310 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 EGLN2Q96KS0 407 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TTTY10Q9BZA0 68 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ZNF407Q9C0G0 2248 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 MROH1Q8NDA8 1641 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TRAV8-4A0A0B4J246 113 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TCRBV5S4A2TA0A5A2 114 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 POM121CA8CG34 1229 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 PAGE4O60829 102 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 AMBPP02760 352 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ELNP15502 786 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms