RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TMEM14DPA8MWL7 114 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 GEMIN2O14893 280 aaKnown RBP11.89□□□□□ -0.51
USP11-207ENST00000478596 NDUFB3O43676 98 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 NDUFB7P17568 137 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 PRDX2P32119 198 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 PITPNBP48739 271 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 SEC61A1P61619 476 aaKnown RBP11.89□□□□□ -0.51
USP11-207ENST00000478596 RPS27AP62979 156 aaKnown RBP11.89□□□□□ -0.51
USP11-207ENST00000478596 PAX2Q02962 417 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 UNC119Q13432 240 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 MPV17LQ2QL34 196 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 ESCO2Q56NI9 601 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 LRRC10Q5BKY1 277 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 FOXB2Q5VYV0 432 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 BRD3OSQ6XYD6 125 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 LRRC28Q86X40 367 aaPredicted RBP11.89□□□□□ -0.51
USP11-207ENST00000478596 OR56B1Q8NGI3 324 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 MCFD2Q8NI22 146 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 PPP1R35Q8TAP8 253 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 SSMEM1Q8WWF3 244 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 H1FXQ92522 213 aaKnown RBP11.89□□□□□ -0.51
USP11-207ENST00000478596 NEIL1Q96FI4 390 aaPredicted RBP11.89□□□□□ -0.51
USP11-207ENST00000478596 MED30Q96HR3 178 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 Q96M66 194 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 RHBDL2Q9NX52 303 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 ING3Q9NXR8 418 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 ADAM30Q9UKF2 790 aa11.89□□□□□ -0.51
USP11-207ENST00000478596 A0A075B6Q4 140 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 H3BUI4 141 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 GPR37O15354 613 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 GPR137BO60478 399 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 OR2H2O95918 312 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 CHRM2P08172 466 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 RAB6AP20340 208 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 VEGFCP49767 419 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 SCAND1P57086 179 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 GNB2P62879 340 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 MRPS15P82914 257 aaKnown RBP11.88□□□□□ -0.51
USP11-207ENST00000478596 EDDM3AQ14507 147 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 ZNF146Q15072 292 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 METAP1DQ6UB28 335 aaPredicted RBP11.88□□□□□ -0.51
USP11-207ENST00000478596 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 ANGPTL6Q8NI99 470 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 GAFA1Q96PS6 74 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 CHST6Q9GZX3 395 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 DNTTIP1Q9H147 329 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 PPA2Q9H2U2 334 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 SPACA1Q9HBV2 294 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 CLN8Q9UBY8 286 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 SPATA2Q9UM82 520 aa11.88□□□□□ -0.51
USP11-207ENST00000478596 TENM2Q9NT68 2774 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
USP11-207ENST00000478596 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 SCGNO76038 276 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 SELLP14151 372 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 BLVRBP30043 206 aaPredicted RBP11.87□□□□□ -0.51
USP11-207ENST00000478596 TALDO1P37837 337 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 EFNB2P52799 333 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 EDDM3BP56851 147 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 ATXN7L3Q14CW9 347 aaPredicted RBP11.87□□□□□ -0.51
USP11-207ENST00000478596 GRK1Q15835 563 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 Q6ZSV7 163 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 GDPD3Q7L5L3 318 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 CD177Q8N6Q3 437 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 OR5H6Q8NGV6 325 aa11.87□□□□□ -0.51
USP11-207ENST00000478596 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
USP11-207ENST00000478596 A0A1B0GW55 424 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A10PA6NDY2 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A18PA6NE21 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A16PA6NEW6 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 A6NHS1 94 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A20PA6NIJ5 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A8PA6NJQ4 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A7PA6NKC0 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A22PA8MWA6 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A12PA8MX19 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A5PA8MXJ8 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A23PA8MXZ1 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 HPGDSO60760 199 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 PDCD6O75340 191 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A15PP0C7V4 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A13PP0C7W8 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A14PP0C7W9 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 FAM90A24PP0C7X0 464 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
USP11-207ENST00000478596 CD37P11049 281 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms