RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 MEIS3Q99687 375 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 FAAP24Q9BTP7 215 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TAPBPLQ9BX59 468 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 FBXL15Q9H469 300 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 POMKQ9H5K3 350 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 RNF167Q9H6Y7 350 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 RPF2Q9H7B2 306 aaKnown RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 UGT1A8Q9HAW9 530 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 PARD6AQ9NPB6 346 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 SLC7A10Q9NS82 523 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 DOK5Q9P104 306 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 DPM3Q9P2X0 92 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 NDRG2Q9UN36 371 aaKnown RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ST3GAL6Q9Y274 331 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 VSIG4Q9Y279 399 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF256Q9Y2P7 627 aaPredicted RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 HSPB11Q9Y547 144 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 RFX7Q2KHR2 1363 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 SCN9AQ15858 1988 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 COL4A1P02462 1669 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 DUOX1Q9NRD9 1551 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 IGHV3OR16-13A0A075B7E8 117 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TRAV9-2A0A087WT02 112 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 A0A087WW49 117 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 IGHV3OR16-9A0A0B4J2B5 98 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 A0A1B0GV50 99 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 PQLC2LA1A4F0 135 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 METTL15A6NJ78 407 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 FOXI3A8MTJ6 420 aaPredicted RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 MIF4GDA9UHW6 222 aaKnown RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 C12orf77C9JDV5 145 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF878C9JN71 531 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 LAD1O00515 517 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 MFNGO00587 321 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 NTN3O00634 580 aaPredicted RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 BHLHE40O14503 412 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 AGPAT2O15120 278 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 PFDN1O60925 122 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 REM1O75628 298 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ATG12O94817 140 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 C6orf47O95873 294 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR5H8P0DN80 308 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TCN2P20062 427 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 RAB3BP20337 219 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TAC1P20366 129 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ANOS1P23352 680 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SLC6A1P30531 599 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TSPOP30536 169 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 PDLIM4P50479 330 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ERFP50548 548 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 P2RY4P51582 365 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 APOC4P55056 127 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 NAA20P61599 178 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SELENOTP62341 195 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 FKBP3Q00688 224 aaKnown RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 CD300CQ08708 224 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SKP2Q13309 424 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TWIST1Q15672 202 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 BATFQ16520 125 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TRMT12Q53H54 448 aaKnown RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ACSBG2Q5FVE4 666 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TTC32Q5I0X7 151 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 CYHR1Q6ZMK1 362 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 H2AFVQ71UI9 128 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OAFQ86UD1 273 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 CDC20BQ86Y33 519 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 CADM2Q8N3J6 435 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 STX19Q8N4C7 294 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 NPWQ8N729 165 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SLC35G3Q8N808 338 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR2Z1Q8NG97 314 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR6T1Q8NGN1 323 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR1N2Q8NGR9 330 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR6N1Q8NGY5 312 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 MCFD2Q8NI22 146 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 FLVCR1-AS1Q8TAF5 88 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SLC37A2Q8TED4 501 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SECTM1Q8WVN6 248 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TAF15Q92804 592 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TAMM41Q96BW9 452 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 PPCDCQ96CD2 204 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 HAUS1Q96CS2 278 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 AURKBQ96GD4 344 aaPredicted RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 DCUN1D1Q96GG9 259 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 FAM210BQ96KR6 192 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SIGMAR1Q99720 223 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 SUCNR1Q9BXA5 334 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF717Q9BY31 904 aaPredicted RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 YTHDF1Q9BYJ9 559 aaKnown RBP2.29□□□□□ -2.04
HMGN4-202ENST00000477243 C20orf85Q9H1P6 137 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 OR51I1Q9H343 314 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TPK1Q9H3S4 243 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 MIEF1Q9NQG6 463 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 RGS18Q9NS28 235 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TAAR2Q9P1P5 351 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 XCL2Q9UBD3 114 aa2.29□□□□□ -2.04
HMGN4-202ENST00000477243 TRMT112Q9UI30 125 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms