RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TMEM267Q0VDI3 215 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-207ENST00000470763 FGF14Q92915 247 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 TMEM222Q9H0R3 208 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 IGKV3D-11A0A0A0MRZ8 115 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 POU2F2P09086 479 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 DOCK11Q5JSL3 2073 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 ATP5SQ99766 215 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 SMIM7Q9BQ49 75 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 P4HTMQ9NXG6 502 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 ALKBH4Q9NXW9 302 aa11.88□□□□□ -0.51
NPHP4-207ENST00000470763 NPIPB13A6NJU9 1138 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 NPIPB4C9JG80 1138 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 PFN1P07737 140 aaKnown RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 HNF4GQ14541 408 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF726P1Q15940 193 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF705AQ6ZN79 300 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 Q6ZPA2 131 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 OR2AE1Q8NHA4 323 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 CBY1Q9Y3M2 126 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 KMT2EQ8IZD2 1858 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 ETV2O00321 342 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 DLEU1O43261 78 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 PPYP01298 95 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 WNT5AP41221 380 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 GRB2P62993 217 aaKnown RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 R3HDM4Q96D70 268 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 RBKSQ9H477 322 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF286AQ9HBT8 521 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 ANKUB1A6NFN9 424 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 DTYMKP23919 212 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 GALR1P47211 349 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 EXT1Q16394 746 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 SLC25A47Q6Q0C1 308 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 H1FOOQ8IZA3 346 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 OR10J5Q8NHC4 309 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 RPUSD4Q96CM3 377 aaKnown RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 PLA2G3Q9NZ20 509 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 SEMA5BQ9P283 1151 aa11.87□□□□□ -0.51
NPHP4-207ENST00000470763 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-207ENST00000470763 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 TRAF3IP2O43734 574 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-207ENST00000470763 RAB4AP20338 218 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 GNRHRP30968 328 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 CTHP32929 405 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 MAML2Q8IZL2 1156 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-207ENST00000470763 SELENOHQ8IZQ5 122 aaKnown RBP11.86□□□□□ -0.51
NPHP4-207ENST00000470763 PP6455Q8WZ26 134 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 ST8SIA1Q92185 356 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 MRGPRX1Q96LB2 322 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 MYOTQ9UBF9 498 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 DIDO1Q9BTC0 2240 aaKnown RBP11.86□□□□□ -0.51
NPHP4-207ENST00000470763 UNC13CQ8NB66 2214 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 CEACAM1P13688 526 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 CLDN17P56750 224 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
NPHP4-207ENST00000470763 PARM1Q6UWI2 310 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 OR51G1Q8NGK1 321 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 OR1N1Q8NGS0 311 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 SIGLEC12Q96PQ1 595 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 SPIN2AQ99865 258 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 SPIN2BQ9BPZ2 258 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 V9GYS6 101 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF407Q9C0G0 2248 aa11.86□□□□□ -0.51
NPHP4-207ENST00000470763 CST2P09228 141 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 SLC7A10Q9NS82 523 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 FER1L5A0AVI2 2057 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 H7BYZ3 331 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
NPHP4-207ENST00000470763 IFNA5P01569 189 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 CD33P20138 364 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 CAPZBP47756 277 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 IZUMO4Q1ZYL8 232 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 Q9N2K0 584 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 FKBP11Q9NYL4 201 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 PRSS50Q9UI38 385 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 A0A1W2PNV4 684 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 LRRC3CA6NJW4 275 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 B4E171 279 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
NPHP4-207ENST00000470763 TSPAN7P41732 249 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 PAX9P55771 341 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 RPS18P62269 152 aaKnown RBP11.85□□□□□ -0.51
NPHP4-207ENST00000470763 YPEL5P62699 121 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 BAXQ07812 192 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 BATFQ16520 125 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 DCAF10Q5QP82 559 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 OR5B12Q96R08 314 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms