RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SGCDQ92629 289 aa17.48■□□□□ 0.39
LIME1-203ENST00000465591 DPCDQ9BVM2 203 aaPredicted RBP17.48■□□□□ 0.39
LIME1-203ENST00000465591 MMP27Q9H306 513 aa17.48■□□□□ 0.39
LIME1-203ENST00000465591 NCOR1P1Q9H4R4 102 aa17.48■□□□□ 0.39
LIME1-203ENST00000465591 CALYQ9NYX4 217 aa17.48■□□□□ 0.39
LIME1-203ENST00000465591 MYL12BO14950 172 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 IGHV3-7P01780 117 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 NFYBP25208 207 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 TAS2R43P59537 309 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 BLCAPP62952 87 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 PAX5Q02548 391 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 SLC22A6Q4U2R8 563 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 ZNF596Q8TC21 504 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 MRGPRDQ8TDS7 321 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 CFHR4Q92496 578 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 LEAP2Q969E1 77 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 DERL3Q96Q80 235 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 ANKRD60Q9BZ19 345 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 BARHL1Q9BZE3 327 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 IFT22Q9H7X7 185 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 PITPNC1Q9UKF7 332 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 RAB26Q9ULW5 256 aa17.47■□□□□ 0.39
LIME1-203ENST00000465591 LY6LH3BQJ8 138 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 BUB1B-PAK6H3BSN5 160 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 OR7C1O76099 320 aaPredicted RBP17.46■□□□□ 0.39
LIME1-203ENST00000465591 VSIG10L2P0DP72 767 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 MYF6P23409 242 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 INSL4Q14641 139 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 LYPD6Q86Y78 171 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 RFESDQ8TAC1 157 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 MUL1Q969V5 352 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 CYYR1Q96J86 154 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 Q9H521 79 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 LINC00574Q9H8X3 128 aa17.46■□□□□ 0.39
LIME1-203ENST00000465591 PAK1IP1Q9NWT1 392 aaPredicted RBP17.46■□□□□ 0.39
LIME1-203ENST00000465591 LEUTXA8MZ59 168 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 NPIPB11E5RHQ5 1161 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 IL1AP01583 271 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 CSTBP04080 98 aaKnown RBP17.45■□□□□ 0.38
LIME1-203ENST00000465591 MAS1P04201 325 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 CD1AP06126 327 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 CDK1P06493 297 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 SSTR5P35346 364 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 LTC4SQ16873 150 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 TMEM95Q3KNT9 176 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 C6orf141Q5SZD1 244 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 TPTE2P1Q5T6R2 138 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 C11orf88Q6PI97 169 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 Q6ZTK2 550 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 IDI2-AS1Q9NZ38 188 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 CKLFQ9UBR5 152 aa17.45■□□□□ 0.38
LIME1-203ENST00000465591 TOR1AO14656 332 aa17.44■□□□□ 0.38
LIME1-203ENST00000465591 KCNJ3P48549 501 aa17.44■□□□□ 0.38
LIME1-203ENST00000465591 RBM39Q14498 530 aaKnown RBP17.44■□□□□ 0.38
LIME1-203ENST00000465591 JAGN1Q8N5M9 183 aa17.44■□□□□ 0.38
LIME1-203ENST00000465591 ZNF565Q8N9K5 539 aa17.44■□□□□ 0.38
LIME1-203ENST00000465591 FAM110DQ8TAY7 271 aaPredicted RBP17.44■□□□□ 0.38
LIME1-203ENST00000465591 WIPF2Q8TF74 440 aaPredicted RBP17.44■□□□□ 0.38
LIME1-203ENST00000465591 OR5M11Q96RB7 305 aa17.44■□□□□ 0.38
LIME1-203ENST00000465591 S100A13Q99584 98 aa17.44■□□□□ 0.38
LIME1-203ENST00000465591 MRPS28Q9Y2Q9 187 aaKnown RBP17.44■□□□□ 0.38
LIME1-203ENST00000465591 PTGES3LE9PB15 166 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 GP2P55259 537 aaKnown RBP17.43■□□□□ 0.38
LIME1-203ENST00000465591 C2orf68Q2NKX9 166 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 ATAD3CQ5T2N8 411 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 GLIPR1L1Q6UWM5 242 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 OR9G1Q8NH87 305 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 PRSS22Q9GZN4 317 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 MMP28Q9H239 520 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 SCN3BQ9NY72 215 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 PSG11Q9UQ72 335 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 ERGIC3Q9Y282 383 aa17.43■□□□□ 0.38
LIME1-203ENST00000465591 LSM2Q9Y333 95 aaKnown RBP17.43■□□□□ 0.38
LIME1-203ENST00000465591 J3QR06 171 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 ZNF780AO75290 641 aaPredicted RBP17.42■□□□□ 0.38
LIME1-203ENST00000465591 GTF2F2P13984 249 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 PRRX1P54821 245 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 DEFA6Q01524 100 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 DIAPH2-AS1Q14236 149 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 MPV17LQ2QL34 196 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 FAM27D1Q5T7N8 215 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 RNLSQ5VYX0 342 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 FAM53AQ6NSI3 398 aaPredicted RBP17.42■□□□□ 0.38
LIME1-203ENST00000465591 LINC00596Q86U02 117 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 LYG1Q8N1E2 194 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 UBALD1Q8TB05 177 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 WNT10AQ9GZT5 417 aa17.42■□□□□ 0.38
LIME1-203ENST00000465591 CSF1P09603 554 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 CD28P10747 220 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 TMEM104Q8NE00 496 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 CNBD2Q96M20 576 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 OCSTAMPQ9BR26 566 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 BANF2Q9H503 90 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 RCC2Q9P258 522 aaKnown RBP17.41■□□□□ 0.38
LIME1-203ENST00000465591 PLXNB1O43157 2135 aa17.41■□□□□ 0.38
LIME1-203ENST00000465591 NOTCH3Q9UM47 2321 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 A0A1W2PPE3 182 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 TMEM30CPA0ZSE6 113 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 C15orf65H3BRN8 121 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 BRS3P32247 399 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms