RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 TSPAN14Q8NG11 270 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 OR6M1Q8NGM8 313 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 RNF141Q8WVD5 230 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 MRPS24Q96EL2 167 aaKnown RBP8.23□□□□□ -1.09
RFX3-210ENST00000457373 CCDC140Q96MF4 163 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 CST11Q9H112 138 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 OR51E2Q9H255 320 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 UNKLQ9H9P5 680 aaKnown RBP8.23□□□□□ -1.09
RFX3-210ENST00000457373 KIF25Q9UIL4 384 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 STUB1Q9UNE7 303 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 SSR3Q9UNL2 185 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 UBE2J1Q9Y385 318 aaPredicted RBP8.23□□□□□ -1.09
RFX3-210ENST00000457373 FAM96BQ9Y3D0 163 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 V9GY05 133 aa8.23□□□□□ -1.09
RFX3-210ENST00000457373 NAV3Q8IVL0 2385 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 TRAV39A0A0B4J263 110 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 DNAJC9-AS1A6NH13 148 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 MCRIP1C9JLW8 97 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 SLC17A2O00624 439 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 SLC22A1O15245 554 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 HOXA3O43365 443 aaPredicted RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 MMP23AO75900 390 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 CD37P11049 281 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 OMGP23515 440 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 SAA4P35542 130 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 GLP1RP43220 463 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 CLDN12P56749 244 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 UBA52P62987 128 aaKnown RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 DYNC1I2Q13409 638 aaKnown RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 SYT6Q5T7P8 510 aaPredicted RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 PRAMEF5Q5TYX0 476 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 RSBN1Q5VWQ0 802 aaPredicted RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 Q6YL49 198 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 OR51D1Q8NGF3 324 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 OR13A1Q8NGR1 328 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 OR13D1Q8NGV5 346 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 CORO2AQ92828 525 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 SLC25A28Q96A46 364 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 Q96M66 194 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 C19orf24Q9BVV8 132 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 GAL3ST2Q9H3Q3 398 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 IFT22Q9H7X7 185 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 TXNL4BQ9NX01 149 aaKnown RBP8.22□□□□□ -1.09
RFX3-210ENST00000457373 TAS2R3Q9NYW6 316 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 OR6C3Q9NZP0 311 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 PEX16Q9Y5Y5 336 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 SESN1Q9Y6P5 492 aa8.22□□□□□ -1.09
RFX3-210ENST00000457373 ZFHX3Q15911 3703 aa8.21□□□□□ -1.09
RFX3-210ENST00000457373 TRAV1-2A0A0B4J238 106 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 UBE2QL1A1L167 161 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 SMIM30A4D0T7 59 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 ZNF729A6NN14 1252 aaPredicted RBP8.21□□□□□ -1.1
RFX3-210ENST00000457373 TMEM14DPA8MWL7 114 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 CLPXO76031 633 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 PAHP00439 452 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 ARG1P05089 322 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 MELTFP08582 738 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 ARSBP15848 533 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 CD36P16671 472 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 RAB3BP20337 219 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 GALP22466 123 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 GADD45AP24522 165 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 CDK2P24941 298 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 PAX6P26367 422 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 GDNFP39905 211 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 KCNJ3P48549 501 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 PSMD7P51665 324 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 LGALS4P56470 323 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 OR10A3P58181 314 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 RBM39Q14498 530 aaKnown RBP8.21□□□□□ -1.1
RFX3-210ENST00000457373 SLC9A3R2Q15599 337 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 RAB11BQ15907 218 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 LTC4SQ16873 150 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 NKAPLQ5M9Q1 402 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 SLC35E4Q6ICL7 350 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 RAB12Q6IQ22 244 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 BAIAP2L2Q6UXY1 529 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 ZNF565Q8N9K5 539 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 KCNG3Q8TAE7 436 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 MRGPRDQ8TDS7 321 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 CCDC107Q8WV48 283 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 C17orf50Q8WW18 174 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 CYYR1Q96J86 154 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 NEDD4LQ96PU5 975 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 CHCHD6Q9BRQ6 235 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 NICN1Q9BSH3 213 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 TMEM59Q9BXS4 323 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 TMEM133Q9H2Q1 129 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 PRDM13Q9H4Q3 707 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 SPACA1Q9HBV2 294 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 VCX3AQ9NNX9 186 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 GFOD1Q9NXC2 390 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 ETAA1Q9NY74 926 aa8.21□□□□□ -1.1
RFX3-210ENST00000457373 LOC100506127A0A0U1RQW1 187 aa8.2□□□□□ -1.1
RFX3-210ENST00000457373 TMEM30CPA0ZSE6 113 aa8.2□□□□□ -1.1
RFX3-210ENST00000457373 FAM172BPA6NC97 362 aa8.2□□□□□ -1.1
RFX3-210ENST00000457373 FAM90A10PA6NDY2 464 aa8.2□□□□□ -1.1
RFX3-210ENST00000457373 FAM90A18PA6NE21 464 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms