RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 TAAR6Q96RI8 345 aa9.08□□□□□ -0.96
LIN54-202ENST00000442461 RNF126Q9BV68 326 aa9.08□□□□□ -0.96
LIN54-202ENST00000442461 TRBV5-7A0A0A0MS05 114 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 A0A1B0GU03 582 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 GDF9O60383 454 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 SMPD2O60906 423 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 SRSF10O75494 262 aaKnown RBP9.07□□□□□ -0.96
LIN54-202ENST00000442461 PRSS1P07477 247 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 UMODP07911 640 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 TMEM50BP56557 158 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 ZNF816Q0VGE8 651 aaPredicted RBP9.07□□□□□ -0.96
LIN54-202ENST00000442461 LINC00615Q96LM1 132 aaPredicted RBP9.07□□□□□ -0.96
LIN54-202ENST00000442461 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 FLRT3Q9NZU0 649 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 SLC45A1Q9Y2W3 748 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 USP54Q70EL1 1684 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 NUP98P52948 1817 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 IGHV2-5P01817 119 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 ADRA2AP08913 450 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 OR4A8P0C604 315 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 KIR3DL2P43630 455 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 SLC35B1P78383 322 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 ZNF77Q15935 545 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 CDCA3Q99618 268 aaPredicted RBP9.07□□□□□ -0.96
LIN54-202ENST00000442461 TPSD1Q9BZJ3 242 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 CLN8Q9UBY8 286 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 DHRS3O75911 302 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 CBLN1P23435 193 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 SUB1P53999 127 aaKnown RBP eCLIP9.07□□□□□ -0.96
LIN54-202ENST00000442461 C1orf100Q5SVJ3 147 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 TMEM215Q68D42 235 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 HS3ST3A1Q9Y663 406 aa9.07□□□□□ -0.96
LIN54-202ENST00000442461 KIAA0100Q14667 2235 aaKnown RBP9.07□□□□□ -0.96
LIN54-202ENST00000442461 FAM157CP0CG43 387 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 GCSHP23434 173 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 NMUP48645 174 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 CRYBA2P53672 197 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 RPS11P62280 158 aaKnown RBP eCLIP9.06□□□□□ -0.96
LIN54-202ENST00000442461 DMWDQ09019 674 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 SRSF5Q13243 272 aaKnown RBP9.06□□□□□ -0.96
LIN54-202ENST00000442461 P2RY6Q15077 328 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 TPTE2P1Q5T6R2 138 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 UNQ5815/PRO19632Q6UWF5 114 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 ZNF683Q8IZ20 524 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 ST8SIA1Q92185 356 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 WFDC6Q9BQY6 131 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 TMEM204Q9BSN7 226 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 KIR3DX1Q9H7L2 352 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 B4GALT7Q9UBV7 327 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 TRAV30A0A087WSZ9 112 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 ZFAND5O76080 213 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 ZNF205O95201 554 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 BTF3P20290 206 aaKnown RBP9.06□□□□□ -0.96
LIN54-202ENST00000442461 EXT1Q16394 746 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 GBGT1Q8N5D6 347 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 WNT5BQ9H1J7 359 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 SH2D2AQ9NP31 389 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 OBP2BQ9NPH6 170 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 SPCS1Q9Y6A9 102 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 SMCHD1A6NHR9 2005 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 TRAV39A0A0B4J263 110 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 NPY1RP25929 384 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 RPS15P62841 145 aaKnown RBP9.06□□□□□ -0.96
LIN54-202ENST00000442461 DPTQ07507 201 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 PDCD1Q15116 288 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 C1QL3Q5VWW1 255 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 OR10G3Q8NGC4 313 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 OR10W1Q8NGF6 305 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 RGPD2P0DJD1 1756 aa9.06□□□□□ -0.96
LIN54-202ENST00000442461 CRYM-AS1A6NIL9 109 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 COX7A2P2O60397 106 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 LINC00869P0C866 280 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 OTX1P32242 354 aaPredicted RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 SHISA6Q6ZSJ9 500 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 PLXDC1Q8IUK5 500 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 GAPTQ8N292 157 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 OR8A1Q8NGG7 326 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 ABHD3Q8WU67 409 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 RLN3Q8WXF3 142 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 JKAMPQ9P055 326 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 ICAM5Q9UMF0 924 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 C2orf72A6NCS6 295 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 H3BVH4 76 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 DUX1O43812 170 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 UPK3AO75631 287 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 CXorf1O96002 111 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 MPZP25189 248 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 UCP3P55916 312 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 TCTN1Q2MV58 587 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 BHLHE23Q8NDY6 225 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 PRSS27Q9BQR3 290 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 KLHDC2Q9Y2U9 406 aa9.05□□□□□ -0.96
LIN54-202ENST00000442461 RGPD8O14715 1765 aaPredicted RBP9.05□□□□□ -0.96
LIN54-202ENST00000442461 VSTM5A8MXK1 200 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms