RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 OR56B4Q8NH76 319 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 CAPSLQ8WWF8 208 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 TMEM106AQ96A25 262 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 MRPL48Q96GC5 212 aaKnown RBP13.56□□□□□ -0.24
CPSF4-203ENST00000430038 GPER1Q99527 375 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 COL7A1Q02388 2944 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 DNAH9Q9NYC9 4486 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 TCRBV4S1A1TA0A5B7 111 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 GEMIN2O14893 280 aaKnown RBP13.55□□□□□ -0.24
CPSF4-203ENST00000430038 IL1AP01583 271 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 ALDOBP05062 364 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 IGFBP3P17936 291 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-203ENST00000430038 GNG10P50151 68 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
CPSF4-203ENST00000430038 IL13RA2Q14627 380 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 RSU1Q15404 277 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 LAIR2Q6ISS4 152 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 C18orf65Q6ZTR6 163 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 ZFP41Q8N8Y5 198 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 ZNF565Q8N9K5 539 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 GPR148Q8TDV2 347 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 NOL4LQ96MY1 436 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-203ENST00000430038 DPCDQ9BVM2 203 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-203ENST00000430038 FAM192AQ9GZU8 254 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 ING4Q9UNL4 249 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 ST3GAL6Q9Y274 331 aa13.55□□□□□ -0.24
CPSF4-203ENST00000430038 TRAV8-7A0A075B6U6 113 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 C15orf65H3BRN8 121 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 BAG2O95816 211 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 CEACAM3P40198 252 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 HNF4GQ14541 408 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 C9orf152Q5JTZ5 239 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 THNSL2Q86YJ6 484 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 MRAPQ8TCY5 172 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 SGCDQ92629 289 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 BARHL1Q9BZE3 327 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 BABAM2Q9NXR7 383 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 SMPD3Q9NY59 655 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-203ENST00000430038 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
CPSF4-203ENST00000430038 TRBV5-5A0A0J9YX44 114 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 OOSP1A8MZH6 123 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 DCKP27707 260 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 C21orf33P30042 268 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-203ENST00000430038 RBM11P57052 281 aaKnown RBP13.53□□□□□ -0.24
CPSF4-203ENST00000430038 KRTAP10-11P60412 298 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 LRRC36Q1X8D7 754 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 DDI2Q5TDH0 399 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 DMKNQ6E0U4 476 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-203ENST00000430038 ETV3LQ6ZN32 361 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 C5orf24Q7Z6I8 188 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 OSR2Q8N2R0 312 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 OR52N1Q8NH53 320 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 GHSRQ92847 366 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 TOMM40LQ969M1 308 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 RPEQ96AT9 228 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 PGLYRP3Q96LB9 341 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 IFT22Q9H7X7 185 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 IL36GQ9NZH8 169 aa13.53□□□□□ -0.24
CPSF4-203ENST00000430038 TSSC4Q9Y5U2 329 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-203ENST00000430038 A0A1W2PPK0 400 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 PIN1P1O15428 100 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 MAGEB3O15480 346 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 CD33P20138 364 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 SERPINA2P20848 420 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF93P35789 620 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-203ENST00000430038 MNDAP41218 407 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 REG1BP48304 166 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 LOXL3P58215 753 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 ADARB1P78563 741 aaKnown RBP13.52□□□□□ -0.25
CPSF4-203ENST00000430038 NHLRC3Q5JS37 347 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 C5orf56Q8N8D9 126 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 CCDC107Q8WV48 283 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 GGHQ92820 318 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 CREB3L1Q96BA8 519 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 SMIM19Q96E16 107 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 AKR1E2Q96JD6 320 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-203ENST00000430038 METTL9Q9H1A3 318 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 TMEM138Q9NPI0 162 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 DIMT1Q9UNQ2 313 aaKnown RBP13.52□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF281Q9Y2X9 895 aa13.52□□□□□ -0.25
CPSF4-203ENST00000430038 IGHV3-43A0A0B4J1X8 118 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 K7EIL1 84 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 OR7C1O76099 320 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-203ENST00000430038 FAM106CPP0CH98 169 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 IGHV3-43DP0DP04 118 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 BDKRB2P30411 391 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 CCDC144NLQ6NUI1 221 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 LYPD6Q86Y78 171 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF555Q8NEP9 628 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF184Q99676 751 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-203ENST00000430038 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
CPSF4-203ENST00000430038 HSPE1-MOB4S4R3N1 261 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms