RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 CHIAQ9BZP6 476 aa18.52■□□□□ 0.56
VSX1-205ENST00000429762 RASL12Q9NYN1 266 aa18.52■□□□□ 0.56
VSX1-205ENST00000429762 TRAPPC2LQ9UL33 140 aa18.52■□□□□ 0.56
VSX1-205ENST00000429762 PPP1R3CQ9UQK1 317 aa18.52■□□□□ 0.56
VSX1-205ENST00000429762 SIX6O95475 246 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 AADACP22760 399 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 VAMP1P23763 118 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 ZBTB25P24278 435 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 LMO1P25800 156 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 ZFP69Q49AA0 526 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 Q6ZS49 121 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 PEG10Q86TG7 708 aaKnown RBP18.51■□□□□ 0.55
VSX1-205ENST00000429762 PRR18Q8N4B5 295 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 CASTOR1Q8WTX7 329 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 RIMS4Q9H426 269 aaPredicted RBP18.51■□□□□ 0.55
VSX1-205ENST00000429762 MYOZ1Q9NP98 299 aaPredicted RBP18.51■□□□□ 0.55
VSX1-205ENST00000429762 PRR13Q9NZ81 148 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 TRBV6-6A0A0A6YYG2 114 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 C19orf84I3L1E1 186 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 HLA-DRB3P79483 266 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 DHRS11Q6UWP2 260 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 COQ2Q96H96 371 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 DECR2Q9NUI1 292 aa18.51■□□□□ 0.55
VSX1-205ENST00000429762 CEACAM18A8MTB9 384 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 GLP1RP43220 463 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 ZNF672Q499Z4 452 aaPredicted RBP18.5■□□□□ 0.55
VSX1-205ENST00000429762 SHEQ5VZ18 495 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 LYG2Q86SG7 212 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 TCTE3Q8IZS6 198 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 KIF25Q9UIL4 384 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 MEIKINA0A087WXM9 373 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 KIR2DS1A0A191URI9 304 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 A0A1B0GW55 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 C9orf170A2RU37 121 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 GOSR2O14653 212 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 CD55P08174 381 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L2P0CJ85 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L3P0CJ86 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L4P0CJ87 422 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L5P0CJ88 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L6P0CJ89 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L7P0CJ90 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 SELLP14151 372 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 KIR2DS4P43632 304 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 KIR2DS1Q14954 304 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 SRSF7Q16629 238 aaKnown RBP eCLIP18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4L9Q6RFH8 374 aaPredicted RBP18.5■□□□□ 0.55
VSX1-205ENST00000429762 OR2AK2Q8NG84 335 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 OR11L1Q8NGX0 322 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 KIRREL1Q96J84 757 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 SHARPINQ9H0F6 387 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 SAP30LQ9HAJ7 183 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 DUX4Q9UBX2 424 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 NPTNQ9Y639 398 aa18.5■□□□□ 0.55
VSX1-205ENST00000429762 SPTBN1Q01082 2364 aaKnown RBP18.49■□□□□ 0.55
VSX1-205ENST00000429762 ADH4P08319 380 aa18.49■□□□□ 0.55
VSX1-205ENST00000429762 EDDM3AQ14507 147 aa18.49■□□□□ 0.55
VSX1-205ENST00000429762 SLC9A3R2Q15599 337 aa18.49■□□□□ 0.55
VSX1-205ENST00000429762 C12orf45Q8N5I9 185 aaPredicted RBP18.49■□□□□ 0.55
VSX1-205ENST00000429762 IL1F10Q8WWZ1 152 aa18.49■□□□□ 0.55
VSX1-205ENST00000429762 DIRC2Q96SL1 478 aa18.49■□□□□ 0.55
VSX1-205ENST00000429762 DHRS9Q9BPW9 319 aa18.49■□□□□ 0.55
VSX1-205ENST00000429762 ZNF436Q9C0F3 470 aaPredicted RBP18.49■□□□□ 0.55
VSX1-205ENST00000429762 TMEM30CPA0ZSE6 113 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 IFNL4K9M1U5 179 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 ZNF728P0DKX0 622 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 ANXA3P12429 323 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 GLIPR1P48060 266 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 EFNB3Q15768 340 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 NLRC3Q7RTR2 1065 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 GAPTQ8N292 157 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 ZNF808Q8N4W9 903 aaPredicted RBP18.48■□□□□ 0.55
VSX1-205ENST00000429762 Q8TCH9 128 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 TMEM204Q9BSN7 226 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 KIAA2026Q5HYC2 2103 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 ZFYVE26Q68DK2 2539 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 ARFGEF3Q5TH69 2177 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 CD34P28906 385 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 IL13RA1P78552 427 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 TESK1Q15569 626 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 FAM90A1Q86YD7 464 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 MUC15Q8N387 334 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 ZNRF1Q8ND25 227 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 DCTN5Q9BTE1 182 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 OR1A1Q9P1Q5 309 aa18.48■□□□□ 0.55
VSX1-205ENST00000429762 C14orf166Q9Y224 244 aaKnown RBP18.48■□□□□ 0.55
VSX1-205ENST00000429762 DSCAMO60469 2012 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 B9A039 149 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 ZNF737O75373 536 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 PPYP01298 95 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 IRF2P14316 349 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 TNFRSF1AP19438 455 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 TAS2R31P59538 309 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 HERV-K104P61576 105 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 KRBOX4Q5JUW0 171 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 DCAF12L2Q5VW00 463 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 TMEM185AQ8NFB2 350 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 ANGPTL6Q8NI99 470 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 MOB3AQ96BX8 217 aa18.47■□□□□ 0.55
VSX1-205ENST00000429762 SCGB3A2Q96PL1 93 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 432.8 ms