RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZNF319Q9P2F9 582 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 KLHL13Q9P2N7 655 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CGGBP1Q9UFW8 167 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CES1P1Q9UKY3 287 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PPP1R3CQ9UQK1 317 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC22A13Q9Y226 551 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 VDAC3Q9Y277 283 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 KLHDC2Q9Y2U9 406 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 HEBP2Q9Y5Z4 205 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 LY96Q9Y6Y9 160 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 BPTFQ12830 3046 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLXNB3Q9ULL4 1909 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CASP8AP2Q9UKL3 1982 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 CTXND1A0A1B0GTU2 59 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 GAGE10A6NGK3 116 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 C4orf47A7E2U8 309 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 P2RY10O00398 339 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC17A3O00476 420 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 B3GALT2O43825 422 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 C1QL1O75973 258 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 GYPAP02724 150 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 KLKB1P03952 638 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 CPMP14384 443 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 IL3RAP26951 378 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 GCH1P30793 250 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 VIPR2P41587 438 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 PPOXP50336 477 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ASCL1P50553 236 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPL15P61313 204 aaKnown RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 QRFPP83859 136 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 PRDX1Q06830 199 aaKnown RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM267Q0VDI3 215 aaPredicted RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM187Q14656 261 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF141Q15928 474 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 STPG1Q5TH74 334 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 PSRC1Q6PGN9 363 aaPredicted RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 RASL11AQ6T310 242 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 Q6ZWC4 215 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 RNF44Q7L0R7 432 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 SYT13Q7L8C5 426 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM144Q7Z5S9 345 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF761Q86XN6 746 aaPredicted RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF695Q8IW36 515 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 FAM89BQ8N5H3 189 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM252Q8N6L7 170 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR10G3Q8NGC4 313 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR1K1Q8NGR3 316 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR2Y1Q8NGV0 311 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC25A40Q8TBP6 338 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRPL30Q8TCC3 161 aaKnown RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 HOXB13Q92826 284 aaPredicted RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 LHX4Q969G2 390 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 SFRP2Q96HF1 295 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 LOXL4Q96JB6 756 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 EAF1Q96JC9 268 aaPredicted RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 BMFQ96LC9 184 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF681Q96N22 645 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 GPER1Q99527 375 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZFYVE21Q9BQ24 234 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 GNB1LQ9BYB4 327 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 VCX2Q9H322 139 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZMAT3Q9HA38 289 aaKnown RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 LYRM4Q9HD34 91 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 C5AR2Q9P296 337 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRPS2Q9Y399 296 aaKnown RBP4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLXNA2O75051 1894 aa4.88□□□□□ -1.63
VTI1BP4-201ENST00000427516 A0A0G2JLL6 359 aaPredicted RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF840PA6NDX5 716 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM88BA6NKF7 163 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 NKX2-2O95096 273 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 MPIG6BO95866 241 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 HLA-DQA1P01909 254 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 GPX1P07203 203 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 C1QTNF9P0C862 333 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 LINC00869P0C866 280 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 COX5AP20674 150 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 PTNP21246 168 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 VDAC1P21796 283 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 NPY1RP25929 384 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 AMTP48728 403 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 PGFP49763 221 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 HINT1P49773 126 aaPredicted RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 DAP3P51398 398 aaKnown RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 GNB2P62879 340 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 CCL20P78556 96 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 HIST1H1AQ02539 215 aaPredicted RBP4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 UNC119Q13432 240 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 RAB31Q13636 194 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 FHL1Q13642 323 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 NFATC4Q14934 902 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM249Q2WGJ8 235 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 HLA-DRB5Q30154 266 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 CCSMST1Q4G0I0 132 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 FAM78BQ5VT40 261 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 C1QL3Q5VWW1 255 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC25A34Q6PIV7 304 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 CBLN3Q6UW01 205 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 GLIPR1L1Q6UWM5 242 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 SPRED2Q7Z698 418 aa4.87□□□□□ -1.63
VTI1BP4-201ENST00000427516 PRRT2Q7Z6L0 340 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms