RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 HYLS1Q96M11 299 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 TMPRSS13Q9BYE2 586 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 FXYD6Q9H0Q3 95 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
ACTB-204ENST00000425660 SLC23A1Q9UHI7 598 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 TUBAL3A6NHL2 446 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 E7EQL1 145 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 G3V3Q6 166 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 TUSC2O75896 110 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 DIRAS3O95661 229 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 TK1P04183 234 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 CD3EP07766 207 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 PI3P19957 117 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 VAMP1P23763 118 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 CD34P28906 385 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SEC61A1P61619 476 aaKnown RBP12.76□□□□□ -0.37
ACTB-204ENST00000425660 HLA-DRB3P79483 266 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SNTB1Q13884 538 aaKnown RBP12.76□□□□□ -0.37
ACTB-204ENST00000425660 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 LPCAT3Q6P1A2 487 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 ZFAND1Q8TCF1 268 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 ZNF486Q96H40 463 aaPredicted RBP12.76□□□□□ -0.37
ACTB-204ENST00000425660 PHB2Q99623 299 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 CABLES2Q9BTV7 478 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
ACTB-204ENST00000425660 ANKHD1Q8IWZ3 2542 aaKnown RBP12.76□□□□□ -0.37
ACTB-204ENST00000425660 DBX1A6NMT0 343 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 NPIPB11E5RHQ5 1161 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 M0R233 179 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SLC22A5O76082 557 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 ZNF205O95201 554 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SFT2D2O95562 160 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 PPYP01298 95 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 PSG2P11465 335 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 RAP2BP61225 183 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 ATXN7L3Q14CW9 347 aaPredicted RBP12.76□□□□□ -0.37
ACTB-204ENST00000425660 EFNB3Q15768 340 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 C4orf17Q53FE4 359 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 FAM209AQ5JX71 171 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 LY6G6FQ5SQ64 297 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SLC35E4Q6ICL7 350 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 CLEC18BQ6UXF7 455 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 CD177Q8N6Q3 437 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 OR2T35Q8NGX2 323 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 FAM222BQ8WU58 562 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 OPN4Q9UHM6 478 aa12.76□□□□□ -0.37
ACTB-204ENST00000425660 IGKV1D-17A0A075B6S4 117 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 TRBV6-7A0A0A0MS04 114 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 A0A0B4J2A0 478 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 GOSR2O14653 212 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 SIAH2O43255 324 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 ZNF737O75373 536 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 ZNF728P0DKX0 622 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 PGAM2P15259 253 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 AGAP20933 346 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 NFYAP23511 347 aaPredicted RBP12.75□□□□□ -0.37
ACTB-204ENST00000425660 PRDX2P32119 198 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 OR3A1P47881 315 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 TESK1Q15569 626 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 SLC38A6Q8IZM9 456 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 ZNF808Q8N4W9 903 aaPredicted RBP12.75□□□□□ -0.37
ACTB-204ENST00000425660 UXS1Q8NBZ7 420 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 OR5M8Q8NGP6 311 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 RNF7Q9UBF6 113 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 SHPKQ9UHJ6 478 aa12.75□□□□□ -0.37
ACTB-204ENST00000425660 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
ACTB-204ENST00000425660 TMEM30CPA0ZSE6 113 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 TNFRSF1AP19438 455 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 AADACP22760 399 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 APOBEC3AP31941 199 aaPredicted RBP12.74□□□□□ -0.37
ACTB-204ENST00000425660 COL10A1Q03692 680 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 TLE1Q04724 770 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 SRSF4Q08170 494 aaKnown RBP12.74□□□□□ -0.37
ACTB-204ENST00000425660 HMGN3Q15651 99 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 TMEM204Q9BSN7 226 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
ACTB-204ENST00000425660 TRAPPC2LQ9UL33 140 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 CFAP46Q8IYW2 2715 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 CRYM-AS1A6NIL9 109 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 BET1O15155 118 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 RGS11O94810 467 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 LOXP28300 417 aaPredicted RBP12.74□□□□□ -0.37
ACTB-204ENST00000425660 RBMXP38159 391 aaKnown RBP12.74□□□□□ -0.37
ACTB-204ENST00000425660 DCAF12L2Q5VW00 463 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 C5orf24Q7Z6I8 188 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 OR11H4Q8NGC9 324 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 TOMM40LQ969M1 308 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 COQ2Q96H96 371 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 DNAJB11Q9UBS4 358 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 PPP1R3CQ9UQK1 317 aa12.74□□□□□ -0.37
ACTB-204ENST00000425660 FAM172BPA6NC97 362 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 DEFB108AA8MXU0 73 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 UQCRFS1P47985 274 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms