RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FOXL2P58012 376 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 HSPB9Q9BQS6 159 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 ARRDC1-AS1Q9H2J1 176 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 IFITM10A6NMD0 228 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 B4DEV8 164 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 P01737 135 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 MDH2P40926 338 aaKnown RBP10.58□□□□□ -0.72
UBR4-205ENST00000417040 SLC23A3Q6PIS1 610 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 SCGB1D4Q6XE38 83 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 ZNF707Q96C28 371 aaPredicted RBP10.58□□□□□ -0.72
UBR4-205ENST00000417040 OR6C3Q9NZP0 311 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 TRGV5A0A0B4J1U4 118 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 TRGV8A0A0C4DH27 118 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 GOSR1O95249 250 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 COL9A1P20849 921 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 HOXC8P31273 242 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 ZNF841Q6ZN19 808 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 ATG4DQ86TL0 474 aaPredicted RBP10.58□□□□□ -0.72
UBR4-205ENST00000417040 VSTM2LQ96N03 204 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 WFDC6Q9BQY6 131 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 ZFC3H1O60293 1989 aaKnown RBP10.58□□□□□ -0.72
UBR4-205ENST00000417040 HELTA6NFD8 242 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 LMX1BO60663 402 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 RSG1Q9BU20 258 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 PPIL1Q9Y3C6 166 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 HTN1P15515 57 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 Q8IYB0 196 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 WDR31Q8NA23 367 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 OR4A4PQ8NGN8 299 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 MRPL30Q8TCC3 161 aaKnown RBP10.58□□□□□ -0.72
UBR4-205ENST00000417040 ZNF488Q96MN9 340 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 GPHA2Q96T91 129 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 PCGF1Q9BSM1 259 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 SIRT7Q9NRC8 400 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 COL16A1Q07092 1604 aaPredicted RBP10.57□□□□□ -0.72
UBR4-205ENST00000417040 TRBV5-3A0A0A0MS03 114 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 PSG6Q00889 435 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 ATP6V1FQ16864 119 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 BPIFA4PQ86YQ2 179 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 SARAFQ96BY9 339 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 MGPP08493 103 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 KIR3DL2P43630 455 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 MRPL37Q9BZE1 423 aaKnown RBP10.57□□□□□ -0.72
UBR4-205ENST00000417040 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 DTX4Q9Y2E6 619 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 CD160O95971 181 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 CD99P14209 185 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 LINC00518Q8N0U6 118 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 PGA4P0DJD7 388 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 PGA5P0DJD9 388 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 NPY1RP25929 384 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 EIF3IQ13347 325 aaKnown RBP10.57□□□□□ -0.72
UBR4-205ENST00000417040 OR13G1Q8NGZ3 307 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 RPEQ96AT9 228 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 TM4SF19Q96DZ7 209 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 ORM1P02763 201 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 OR5A2Q8NGI9 324 aa10.57□□□□□ -0.72
UBR4-205ENST00000417040 UBE2ZQ9H832 354 aaPredicted RBP10.57□□□□□ -0.72
UBR4-205ENST00000417040 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 EML2O95834 649 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 CISD3P0C7P0 127 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 CDIPTO14735 213 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 HAND1O96004 215 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 LBHQ53QV2 105 aaPredicted RBP10.56□□□□□ -0.72
UBR4-205ENST00000417040 ZNF766Q5HY98 468 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 OR2M3Q8NG83 312 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 HES7Q9BYE0 225 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 GHITMQ9H3K2 345 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 H7C2G1 150 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 PITX3O75364 302 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 MELTFP08582 738 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 COL8A1P27658 744 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 PRSS53Q2L4Q9 553 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 DEGS2Q6QHC5 323 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 MRGPRGQ86SM5 289 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 GPR61Q9BZJ8 451 aa10.56□□□□□ -0.72
UBR4-205ENST00000417040 PDE6DO43924 150 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 ZNF345Q14585 488 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 UCN2Q96RP3 112 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 TLNRD1Q9H1K6 362 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 CBLN4Q9NTU7 201 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 IL36RNQ9UBH0 155 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 H0YL77 283 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBR4-205ENST00000417040 ANKRD33Q7Z3H0 272 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 OR2I1PQ8NGU4 316 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 TMEM167BQ9NRX6 74 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 PCOLCE2Q9UKZ9 415 aa10.55□□□□□ -0.72
UBR4-205ENST00000417040 KCNK7Q9Y2U2 307 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms