RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TSPAN15O95858 294 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 CSTBP04080 98 aaKnown RBP14.21□□□□□ -0.13
LSM5-204ENST00000409909 CDK1P06493 297 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 CD24P25063 80 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 KCNJ3P48549 501 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 AQP4P55087 323 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 BLCAPP62952 87 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 HERPUD1Q15011 391 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 HLA-DRB5Q30154 266 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 SLC22A6Q4U2R8 563 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 FBLN7Q53RD9 439 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 RNLSQ5VYX0 342 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 C11orf88Q6PI97 169 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 LYPD6Q86Y78 171 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 CFHR4Q92496 578 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 MUL1Q969V5 352 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 S100A13Q99584 98 aa14.21□□□□□ -0.13
LSM5-204ENST00000409909 PAK1IP1Q9NWT1 392 aaPredicted RBP14.21□□□□□ -0.13
LSM5-204ENST00000409909 LEUTXA8MZ59 168 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 NPIPB11E5RHQ5 1161 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 PTGES3LE9PB15 166 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 TOR1AO14656 332 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 WIPF1O43516 503 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 ZNF780AO75290 641 aaPredicted RBP14.2□□□□□ -0.14
LSM5-204ENST00000409909 MAS1P04201 325 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 PRRX1P54821 245 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 INSL4Q14641 139 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 C11orf44Q8N8P7 122 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 RFESDQ8TAC1 157 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 MRGPRDQ8TDS7 321 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 LEAP2Q969E1 77 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 MMP27Q9H306 513 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 ERGIC3Q9Y282 383 aa14.2□□□□□ -0.14
LSM5-204ENST00000409909 MRPS28Q9Y2Q9 187 aaKnown RBP14.2□□□□□ -0.14
LSM5-204ENST00000409909 TET2Q6N021 2002 aaPredicted RBP14.2□□□□□ -0.14
LSM5-204ENST00000409909 KCNAB3O43448 404 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 IL1AP01583 271 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 IGHV3-7P01780 117 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 VSIG10L2P0DP72 767 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 GTF2F2P13984 249 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 SSTR5P35346 364 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 GP2P55259 537 aaKnown RBP14.19□□□□□ -0.14
LSM5-204ENST00000409909 TPTE2P1Q5T6R2 138 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 GLIPR1L1Q6UWM5 242 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 Q6ZTK2 550 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 LINC00596Q86U02 117 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 OR5M11Q96RB7 305 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 IDI2-AS1Q9NZ38 188 aa14.19□□□□□ -0.14
LSM5-204ENST00000409909 LSM2Q9Y333 95 aaKnown RBP14.19□□□□□ -0.14
LSM5-204ENST00000409909 RBM39Q14498 530 aaKnown RBP14.18□□□□□ -0.14
LSM5-204ENST00000409909 LTC4SQ16873 150 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 MPV17LQ2QL34 196 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 ATAD3CQ5T2N8 411 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 CDH26Q8IXH8 852 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 DTX3Q8N9I9 347 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 OR9G1Q8NH87 305 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 CREB3L1Q96BA8 519 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 MND1Q9BWT6 205 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 PRSS22Q9GZN4 317 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 MMP28Q9H239 520 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 PCDHB16Q9NRJ7 776 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 PSG11Q9UQ72 335 aa14.18□□□□□ -0.14
LSM5-204ENST00000409909 J3QR06 171 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 BRS3P32247 399 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 CEACAM3P40198 252 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 GPR176Q14439 515 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 IRF3Q14653 427 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 C2orf68Q2NKX9 166 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 UNQ9370/PRO34162Q6UXP9 181 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 TMEM104Q8NE00 496 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 FAM110DQ8TAY7 271 aaPredicted RBP14.17□□□□□ -0.14
LSM5-204ENST00000409909 WIPF2Q8TF74 440 aaPredicted RBP14.17□□□□□ -0.14
LSM5-204ENST00000409909 MYDGFQ969H8 173 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 CYYR1Q96J86 154 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 BANF2Q9H503 90 aa14.17□□□□□ -0.14
LSM5-204ENST00000409909 RCC2Q9P258 522 aaKnown RBP14.17□□□□□ -0.14
LSM5-204ENST00000409909 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 MT-ND4P03905 459 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 GZMHP20718 246 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 SLC35A2P78381 396 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 GABPB1Q06547 395 aaPredicted RBP14.16□□□□□ -0.14
LSM5-204ENST00000409909 SPHARQ15513 63 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 TMEM95Q3KNT9 176 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 ACSM3Q53FZ2 586 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 FAM27D1Q5T7N8 215 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 ZNF497Q6ZNH5 498 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 OR10A7Q8NGE5 316 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 CCDC107Q8WV48 283 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 WNT10AQ9GZT5 417 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 SCN3BQ9NY72 215 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 TGP01266 2768 aa14.16□□□□□ -0.14
LSM5-204ENST00000409909 OOSP1A8MZH6 123 aa14.15□□□□□ -0.14
LSM5-204ENST00000409909 C15orf65H3BRN8 121 aa14.15□□□□□ -0.14
LSM5-204ENST00000409909 CSF1P09603 554 aa14.15□□□□□ -0.14
LSM5-204ENST00000409909 CD28P10747 220 aa14.15□□□□□ -0.14
LSM5-204ENST00000409909 MYF6P23409 242 aa14.15□□□□□ -0.14
LSM5-204ENST00000409909 MAPK3P27361 379 aaPredicted RBP14.15□□□□□ -0.14
LSM5-204ENST00000409909 VHLP40337 213 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms