RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SPAG17Q6Q759 2223 aa7.45□□□□□ -1.22
CHD8-201ENST00000399982 LINC01387J3KSC0 135 aa7.45□□□□□ -1.22
CHD8-201ENST00000399982 PTPMT1Q8WUK0 201 aaPredicted RBP7.45□□□□□ -1.22
CHD8-201ENST00000399982 MS4A6EQ96DS6 147 aa7.45□□□□□ -1.22
CHD8-201ENST00000399982 DAPP1Q9UN19 280 aa7.45□□□□□ -1.22
CHD8-201ENST00000399982 LIM2P55344 173 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 TRBV5-4A0A0C4DH59 114 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 HOXA3O43365 443 aaPredicted RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 ZNF83P51522 516 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 SPPL3Q8TCT6 385 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 A0A0U1RQS6 177 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 TMEM30CPA0ZSE6 113 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 HPXP02790 462 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 FOLR2P14207 255 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 DPTQ07507 201 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 TMEM52BQ4KMG9 183 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 DMRTC1Q5HYR2 192 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 NHLRC1Q6VVB1 395 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 NIT1Q86X76 327 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 Q8WTZ3 238 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 MRGPRX3Q96LB0 322 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 NDUFAF3Q9BU61 184 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 OPN3Q9H1Y3 402 aaPredicted RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 A0A087WWC5 75 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 GNG7O60262 68 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 NTHL1P78549 312 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 IFITM2Q01629 132 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 UBALD2Q8IYN6 164 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 SIGLEC7Q9Y286 467 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 LAMA4Q16363 1823 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 PIK3C2AO00443 1686 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 LAMB4A4D0S4 1761 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 MED19A0JLT2 244 aaPredicted RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 A8MXK9 166 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 ZNF79Q15937 498 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 C8orf82Q6P1X6 216 aaPredicted RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 DNAJB12Q9NXW2 375 aaKnown RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 SPRY1O43609 319 aaPredicted RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 CCR5P51681 352 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 KLF3P57682 345 aaPredicted RBP7.44□□□□□ -1.22
CHD8-201ENST00000399982 Q5PR19 223 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 ASCL3Q9NQ33 180 aa7.44□□□□□ -1.22
CHD8-201ENST00000399982 NPIPB8E9PQR5 432 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 RBFOX2O43251 390 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHD8-201ENST00000399982 NXPH1P58417 271 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 LHX8Q68G74 356 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 ANKRD34AQ69YU3 496 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 ZNF660Q6AZW8 331 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 SLCO1C1Q9NYB5 712 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 A0A087WUJ7 227 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 ZNF865P0CJ78 1059 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 TRDCB7Z8K6 153 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 MICBQ29980 383 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 METRNLQ641Q3 311 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 EBLN2Q6P2I7 272 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 OR4P4Q8NGL7 312 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 SNRNP40Q96DI7 357 aaKnown RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 TMUB1Q9BVT8 246 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 RAB1BQ9H0U4 201 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 GEMIN7Q9H840 131 aaKnown RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 F11RQ9Y624 299 aaKnown RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 MKRN2OSH3BPM6 223 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 CA11O75493 328 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 ZFPL1O95159 310 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 VENTXO95231 258 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 CA3P07451 260 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 OR10AG1Q8NH19 301 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 FBLIM1Q8WUP2 373 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 TOX2Q96NM4 488 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 CDX2Q99626 313 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 GABRG3Q99928 467 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 H0YIG0 161 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 CDX4O14627 284 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 RAB9AP51151 201 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 SLC37A1P57057 533 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 ZNF117Q03924 483 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 LINC00596Q86U02 117 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 MORN4Q8NDC4 146 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 MRPL30Q8TCC3 161 aaKnown RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 SPANXDQ9BXN6 97 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 TMEM136Q6ZRR5 245 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 LDLRAD3Q86YD5 345 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 FAM181AQ8N9Y4 354 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 INSM2Q96T92 566 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 A0A0B4J2E0 115 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 A0A1B0GX12 115 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 PRR32B1ATL7 298 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 PDCD6O75340 191 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 SBK3P0C264 359 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 MUC1P15941 1255 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 EPHA8P29322 1005 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 KCNMB1Q16558 191 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 VAX1Q5SQQ9 334 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 SAMD13Q5VXD3 122 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 ZNF770Q6IQ21 691 aaPredicted RBP7.43□□□□□ -1.22
CHD8-201ENST00000399982 ALKAL1Q6UXT8 129 aa7.43□□□□□ -1.22
CHD8-201ENST00000399982 CA10Q9NS85 328 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms