RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MOB3AQ96BX8 217 aa20.7■□□□□ 0.9
CSNK1E-203ENST00000396832 NPIPA2E9PIF3 369 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 NPIPA3F8WFD2 350 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 COL10A1Q03692 680 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 SMRP1Q8NCR6 262 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 DEFB126Q9BYW3 111 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 METTL9Q9H1A3 318 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF774Q6NX45 483 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 NABP1Q96AH0 204 aa20.69■□□□□ 0.9
CSNK1E-203ENST00000396832 HSPB6O14558 160 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 MPPED1O15442 326 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 AADACP22760 399 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 SDF2L1Q9HCN8 221 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 IGKV1-12A0A0C4DH73 117 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 TMEM50AO95807 157 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 IGKV1D-12P01611 117 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 LCATP04180 440 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 CEACAM1P13688 526 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 GLB1P16278 677 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF154Q13106 437 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 ABLIM2Q6H8Q1 611 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 ULBP2Q9BZM5 246 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 LRFN1Q9P244 771 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 ZFAND5O76080 213 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 UCP3P55916 312 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 HERV-K104P61576 105 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 Q6ZPA2 131 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF695Q8IW36 515 aa20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 SPACA9Q96E40 222 aaPredicted RBP20.68■□□□□ 0.9
CSNK1E-203ENST00000396832 DFFBO76075 338 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 MMP9P14780 707 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 ALKBH3Q96Q83 286 aaPredicted RBP20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 HIPK2Q9H2X6 1198 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 P4HTMQ9NXG6 502 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 UBE2J1Q9Y385 318 aaPredicted RBP20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 PI4KAP42356 2102 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 A0A0U1RQV5 110 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 KCNMB1Q16558 191 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 SPIN3Q5JUX0 258 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 DPPA3Q6W0C5 159 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 IL22RA1Q8N6P7 574 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 HIST1H2AAQ96QV6 131 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 TMEM222Q9H0R3 208 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 MTCH2Q9Y6C9 303 aa20.67■□□□□ 0.9
CSNK1E-203ENST00000396832 XKRY2A2RUG3 117 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 TNFSF11O14788 317 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 ADAM20O43506 726 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 CD55P08174 381 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 B4GALT1P15291 398 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 CTSSP25774 331 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 TAS2R30P59541 319 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 CLN3Q13286 438 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 THNSL2Q86YJ6 484 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 DOCK7Q96N67 2140 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 SRD5A3Q9H8P0 318 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 FSCN3Q9NQT6 498 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 CISD1Q9NZ45 108 aaKnown RBP20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 GAB2Q9UQC2 676 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 DHHO43323 396 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 GCGP01275 180 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 BORCS8Q96FH0 119 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF665Q9H7R5 613 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF286AQ9HBT8 521 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 ST3GAL6Q9Y274 331 aa20.66■□□□□ 0.9
CSNK1E-203ENST00000396832 RAB30Q15771 203 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 SLC25A53Q5H9E4 307 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 SNHG12Q9BXW3 62 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 TRAV1-1A0A0B4J248 108 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 ETV2O00321 342 aaPredicted RBP20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 OR7C1O76099 320 aaPredicted RBP20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 BCL2P10415 239 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 MSX1P28360 303 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 SHBQ15464 509 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF468Q5VIY5 522 aaPredicted RBP20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 WDR25Q64LD2 544 aaPredicted RBP20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 SPIN2AQ99865 258 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 SPIN2BQ9BPZ2 258 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 ZNF442Q9H7R0 627 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 ADAMTS20P59510 1910 aa20.65■□□□□ 0.9
CSNK1E-203ENST00000396832 SRPXP78539 464 aa20.64■□□□□ 0.9
CSNK1E-203ENST00000396832 BAXQ07812 192 aa20.64■□□□□ 0.9
CSNK1E-203ENST00000396832 NAT6Q93015 286 aa20.64■□□□□ 0.9
CSNK1E-203ENST00000396832 ATP5SQ99766 215 aa20.64■□□□□ 0.9
CSNK1E-203ENST00000396832 CHST1O43916 411 aa20.64■□□□□ 0.89
CSNK1E-203ENST00000396832 FAM180AQ6UWF9 173 aa20.64■□□□□ 0.89
CSNK1E-203ENST00000396832 H1FOOQ8IZA3 346 aaPredicted RBP20.64■□□□□ 0.89
CSNK1E-203ENST00000396832 CTDSP1Q9GZU7 261 aa20.64■□□□□ 0.89
CSNK1E-203ENST00000396832 CHCHD2Q9Y6H1 151 aaPredicted RBP20.64■□□□□ 0.89
CSNK1E-203ENST00000396832 CACNA1EQ15878 2313 aa20.64■□□□□ 0.89
CSNK1E-203ENST00000396832 C3orf80F5H4A9 247 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 PPYP01298 95 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 RELQ04864 619 aaPredicted RBP20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 P2RY6Q15077 328 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 LCN15Q6UWW0 184 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 SELENOHQ8IZQ5 122 aaKnown RBP20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 DNASE2BQ8WZ79 361 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 SPTSSAQ969W0 71 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 FREM1Q5H8C1 2179 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 CCL3P10147 92 aa20.63■□□□□ 0.89
CSNK1E-203ENST00000396832 SFTPCP11686 197 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms