RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TMEM171Q8WVE6 324 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 CLEC4MQ9H2X3 399 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-204ENST00000395454 TMEM100Q9NV29 134 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 AKAP6Q13023 2319 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 FBN2P35556 2912 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 RFPL4AA6NLU0 287 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 E7EQL1 145 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 RFPL4AL1F8VTS6 287 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 GOSR1O95249 250 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 VAMP1P23763 118 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 OR8G1Q15617 311 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF488Q96MN9 340 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 SLC23A1Q9UHI7 598 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 DUSP13Q9UII6 198 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 HECTD1Q9ULT8 2610 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 TRAV14DV4A0A0A6YYC5 116 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-204ENST00000395454 FAM221AA4D161 298 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 PTBP3O95758 552 aaKnown RBP12.74□□□□□ -0.37
SCAF11-204ENST00000395454 NFYAP23511 347 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-204ENST00000395454 GCH1P30793 250 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 SEC61A1P61619 476 aaKnown RBP12.74□□□□□ -0.37
SCAF11-204ENST00000395454 FGL1Q08830 312 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 BAMBIQ13145 260 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 SPIN3Q5JUX0 258 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 Q6ZR03 302 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 POC1AQ8NBT0 407 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 MOB3AQ96BX8 217 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 WDR13Q9H1Z4 485 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 CXXC4Q9H2H0 198 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 RAB18Q9NP72 206 aa12.74□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF250P15622 560 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 CXCL2P19875 107 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 GLRA1P23415 457 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF81P51508 661 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 TLE4Q04727 773 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 RBM39Q14498 530 aaKnown RBP12.73□□□□□ -0.37
SCAF11-204ENST00000395454 ADIPOQQ15848 244 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 MSMPQ1L6U9 139 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 C11orf53Q8IXP5 236 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 MARVELD3Q96A59 401 aa12.73□□□□□ -0.37
SCAF11-204ENST00000395454 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
SCAF11-204ENST00000395454 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 CRYM-AS1A6NIL9 109 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 VSTM5A8MXK1 200 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 H0YL77 283 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 OR4A8P0C604 315 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 RPA2P15927 270 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 PI3P19957 117 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 C4BPBP20851 252 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 MDH2P40926 338 aaKnown RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 KIR2DS4P43632 304 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 GMFBP60983 142 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 KIR2DS1Q14954 304 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 LRP11Q86VZ4 500 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF295-AS1Q8N0V1 137 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 MRPL30Q8TCC3 161 aaKnown RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 SYT3Q9BQG1 590 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 DPCDQ9BVM2 203 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 SLC25A4P12235 298 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 APOBEC3AP31941 199 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 SERPINF1P36955 418 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 KLF3P57682 345 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 SELENOVP59797 346 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 ANKRD55Q3KP44 614 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 TEX261Q6UWH6 196 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 COQ8AQ8NI60 647 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 CASTOR1Q8WTX7 329 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 MRPL24Q96A35 216 aaKnown RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 ELMOD3Q96FG2 381 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 MRPL37Q9BZE1 423 aaKnown RBP12.72□□□□□ -0.37
SCAF11-204ENST00000395454 U3KQ87 197 aa12.72□□□□□ -0.37
SCAF11-204ENST00000395454 CHD3Q12873 2000 aaKnown RBP12.71□□□□□ -0.37
SCAF11-204ENST00000395454 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 CDIPTO14735 213 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 HS3ST1O14792 307 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 TIMM8AO60220 97 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-204ENST00000395454 TUSC2O75896 110 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 IGHV3-13P01766 116 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 CTXN2P0C2S0 81 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 PGAM2P15259 253 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 FCGR2CP31995 323 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 GLP1RP43220 463 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 MUC15Q8N387 334 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 NMES1Q9C002 83 aa12.71□□□□□ -0.37
SCAF11-204ENST00000395454 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 H7C1Q1 480 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 M0R233 179 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 SLC33A1O00400 549 aaPredicted RBP12.7□□□□□ -0.38
SCAF11-204ENST00000395454 MPC2O95563 127 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms