RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ROM1Q03395 351 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 MRM1Q6IN84 353 aaKnown RBP13.01□□□□□ -0.33
LRRK1-201ENST00000388948 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 MYPOPQ86VE0 399 aaPredicted RBP13.01□□□□□ -0.33
LRRK1-201ENST00000388948 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 FAM222BQ8WU58 562 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 RAXQ9Y2V3 346 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 LOC101059948A0A1B0GTJ6 334 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 K7N7A8 449 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 NEURL1O76050 574 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 FAM219AQ8IW50 185 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 ZDHHC22Q8N966 263 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 C5orf17Q8NAS9 161 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 ACACAQ13085 2346 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 FAM181BA6NEQ2 426 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 TBC1D26Q86UD7 250 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 SLC52A3Q9NQ40 469 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 PRSS50Q9UI38 385 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 NPAS1Q99742 590 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 HIST1H1EP10412 219 aaKnown RBP13□□□□□ -0.33
LRRK1-201ENST00000388948 GABRA6Q16445 453 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 ITLN1Q8WWA0 313 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 PRNDQ9UKY0 176 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 STARD10Q9Y365 291 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 IGHV3OR16-10A0A075B7F0 116 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 OR2T8A6NH00 312 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 GAPDHP04406 335 aaKnown RBP13□□□□□ -0.33
LRRK1-201ENST00000388948 MGPP08493 103 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 ZDHHC8Q9ULC8 765 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 SCGB1C2P0DMR2 95 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 HTR1DP28221 377 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 DCAF12L2Q5VW00 463 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 ZAR1Q86SH2 424 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 C17orf47Q8NEP4 570 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 SPTBN1Q01082 2364 aaKnown RBP13□□□□□ -0.33
LRRK1-201ENST00000388948 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 IGHV3-72A0A0B4J1Y9 119 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 HSBP1O75506 76 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 CTAG2O75638 210 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 IZUMO4Q1ZYL8 232 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 GATCO43716 136 aaKnown RBP13□□□□□ -0.33
LRRK1-201ENST00000388948 SYNGR1O43759 233 aa13□□□□□ -0.33
LRRK1-201ENST00000388948 DAOP14920 347 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 TEX30Q5JUR7 227 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 LSMEM1Q8N8F7 131 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 NQO2P16083 231 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 INSL4Q14641 139 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 PIGYQ3MUY2 71 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 PRSS3P2Q8NHM4 247 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 NOL4LQ96MY1 436 aaPredicted RBP12.99□□□□□ -0.33
LRRK1-201ENST00000388948 ZNF629Q9UEG4 869 aaPredicted RBP12.99□□□□□ -0.33
LRRK1-201ENST00000388948 ASPDHA6ND91 283 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 RPL7P18124 248 aaKnown RBP12.99□□□□□ -0.33
LRRK1-201ENST00000388948 GGNBP1Q5YKI7 109 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 MUC15Q8N387 334 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 DTX4Q9Y2E6 619 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 HS3ST3B1Q9Y662 390 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 TMEM229AB2RXF0 380 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 C1QAP02745 245 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 TMEM52Q8NDY8 209 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 MRM2Q9UI43 246 aaKnown RBP12.99□□□□□ -0.33
LRRK1-201ENST00000388948 RELL2Q8NC24 303 aaPredicted RBP12.99□□□□□ -0.33
LRRK1-201ENST00000388948 LAMB2P55268 1798 aa12.99□□□□□ -0.33
LRRK1-201ENST00000388948 PDZK1IP1Q13113 114 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 GVQW1Q8N7I0 195 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 RNF2Q99496 336 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 RPS4Y1P22090 263 aaKnown RBP12.98□□□□□ -0.33
LRRK1-201ENST00000388948 ARF6P62330 175 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 MPV17LQ2QL34 196 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
LRRK1-201ENST00000388948 CHST1O43916 411 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 CSF2RBP32927 897 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 OR4X1Q8NH49 305 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
LRRK1-201ENST00000388948 COL6A6A6NMZ7 2263 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 ADAM10O14672 748 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 RAB29O14966 203 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 LAMTOR1Q6IAA8 161 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 ZNF426Q9BUY5 554 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 MIOXQ9UGB7 285 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 GDF9O60383 454 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 TPRX1Q8N7U7 411 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 ABHD17AQ96GS6 310 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 SRRQ9GZT4 340 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 EXOGQ9Y2C4 368 aaKnown RBP12.98□□□□□ -0.33
LRRK1-201ENST00000388948 ZNHIT1O43257 154 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 GALR1P47211 349 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 TM4SF20Q53R12 229 aa12.98□□□□□ -0.33
LRRK1-201ENST00000388948 FOXD3Q9UJU5 478 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms