RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SSR4P51571 173 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 USF2Q15853 346 aaPredicted RBP14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 ZNF468Q5VIY5 522 aaPredicted RBP14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 C1orf87Q8N0U7 546 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 OR5C1Q8NGR4 320 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 BORCS8Q96FH0 119 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 HIST1H2BLQ99880 126 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 SLC25A31Q9H0C2 315 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 PLEKHF2Q9H8W4 249 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 NKX2-6A6NCS4 301 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 SYNGR3O43761 229 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 NKX2-1P43699 371 aaPredicted RBP14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 RAC1P63000 192 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 SSPNQ14714 243 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 CLDND2Q8NHS1 167 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 TP53RKQ96S44 253 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 ATG101Q9BSB4 218 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 WDR54Q9H977 334 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 IGKV1-12A0A0C4DH73 117 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 B4DEV8 164 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 IGKV1D-12P01611 117 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 PGA5P0DJD9 388 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 DTYMKP23919 212 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 OR1F12Q8NHA8 337 aa14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 RBMXL1Q96E39 390 aaKnown RBP14.31□□□□□ -0.12
PCDHA1-201ENST00000378133 PHOX2AO14813 284 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 KLF7O75840 302 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 FGF5P12034 268 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 B4GALT1P15291 398 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 RAB35Q15286 201 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 HLA-BQ31612 363 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 LBHQ53QV2 105 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 LYSMD4Q5XG99 296 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 SP5Q6BEB4 398 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 YRDCQ86U90 279 aaKnown RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 RPS19BP1Q86WX3 136 aaKnown RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 TMEM252Q8N6L7 170 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 OR5R1Q8NH85 324 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 SNX22Q96L94 193 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 ALKBH3Q96Q83 286 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 MAGT1Q9H0U3 335 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 RIMS4Q9H426 269 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 SIT1Q9Y3P8 196 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 PROB1E7EW31 1015 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 SSSCA1O60232 199 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 CST7O76096 145 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 NRASP01111 189 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 ZNF32P17041 273 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 CD200P41217 278 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 NUTF2P61970 127 aaKnown RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 RUNX1Q01196 453 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 TLE4Q04727 773 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 CNN3Q15417 329 aaKnown RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 OR8G1Q15617 311 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 PRR18Q8N4B5 295 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 TMEM217Q8N7C4 229 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 CCDC71LQ8N9Z2 235 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 GNPNAT1Q96EK6 184 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 TP53TG5Q9Y2B4 290 aa14.3□□□□□ -0.12
PCDHA1-201ENST00000378133 CBR3O75828 277 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 CDS2O95674 445 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 CCL4P13236 92 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 DYNLT3P51808 116 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 VAMP2P63027 116 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 EXT1Q16394 746 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 CMTM1Q8IZ96 169 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 ZNF732B4DXR9 585 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 C9J4A7 227 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 CLDN34H7C241 214 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 PDGFBP01127 241 aaPredicted RBP14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 BATF2Q8N1L9 274 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 GPR137CQ8N3F9 429 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 IFI44Q8TCB0 444 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 GLRX2Q9NS18 164 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 LYRM2Q9NU23 88 aaPredicted RBP14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 ST3GAL6Q9Y274 331 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 MUC3AQ02505 3323 aa14.29□□□□□ -0.12
PCDHA1-201ENST00000378133 C3orf85A0A1B0GTC6 90 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 MARCH11A6NNE9 402 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 TGOLN2O43493 480 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 HBE1P02100 147 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 SNRPCP09234 159 aaKnown RBP14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 FUT3P21217 361 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 RAB11AP62491 216 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 IL11RAQ14626 422 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 TCEAL6Q6IPX3 200 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 OSR2Q8N2R0 312 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 MOB3AQ96BX8 217 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 SH2D2AQ9NP31 389 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 TMEM38BQ9NVV0 291 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 PITPNC1Q9UKF7 332 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 MKRN2OSH3BPM6 223 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 CYC1P08574 325 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 PAX1P15863 534 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 RAC3P60763 192 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 HERV-K104P61576 105 aa14.28□□□□□ -0.12
PCDHA1-201ENST00000378133 LHFPL2Q6ZUX7 228 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms