RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 WIPI1Q5MNZ9 446 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 SPNS3Q6ZMD2 512 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 OR5AU1Q8NGC0 362 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 RFESDQ8TAC1 157 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 RAB33BQ9H082 229 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 TRAV17A0A0B4J275 112 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 KCNK15Q9H427 330 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 ASCC3Q8N3C0 2202 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 TRANK1O15050 2925 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 BCL3P20749 454 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 PSG6Q00889 435 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 KLF9Q13886 244 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 TBC1D26Q86UD7 250 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 TRIOBPQ9H2D6 2365 aa10.82□□□□□ -0.68
NPLOC4-202ENST00000374747 A0A1W2PQD3 144 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 ZNF25P17030 456 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 UBE2L3P68036 154 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 PABPC1L2AQ5JQF8 200 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 TM4SF19Q96DZ7 209 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 SCARF2Q96GP6 870 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 NPAS1Q99742 590 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 STARD10Q9Y365 291 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 SEMA7AO75326 666 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 ACAA1P09110 424 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 RNPS1Q15287 305 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 SPINK9Q5DT21 86 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 DPPA3Q6W0C5 159 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 RAB24Q969Q5 203 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 WDR13Q9H1Z4 485 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 SRD5A3Q9H8P0 318 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 PARP11Q9NR21 331 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 IL36GQ9NZH8 169 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 PITPNC1Q9UKF7 332 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 CES1P1Q9UKY3 287 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 PATE3B3GLJ2 98 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 RPL7P18124 248 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 OR11G2Q8NGC1 345 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 ADIPOR1Q96A54 375 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 MS4A7Q9GZW8 240 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 SEBOXQ9HB31 216 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 IGKV1-8A0A0C4DH67 115 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 FOXS1O43638 330 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 LANCL1O43813 399 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 VDAC1P21796 283 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 BMI1P35226 326 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 LOXL4Q96JB6 756 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 MOGAT1Q96PD6 335 aa10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 MYOZ1Q9NP98 299 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 TECRQ9NZ01 308 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-202ENST00000374747 OR2T8A6NH00 312 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 ZNF98A6NK75 572 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 SLC25A30Q5SVS4 291 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 VASH2Q86V25 355 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 OR13G1Q8NGZ3 307 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 GPR27Q9NS67 375 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 PRR13Q9NZ81 148 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 FUT9Q9Y231 359 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 OR5B21A6NL26 309 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 H3BQ15 152 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 DEDDO75618 318 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 MAP1LC3CQ9BXW4 147 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 WASHC3Q9Y3C0 194 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 CHST1O43916 411 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 CCL4P13236 92 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 B2MP61769 119 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 ZNF345Q14585 488 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 IRF3Q14653 427 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 ZNF79Q15937 498 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 MPV17LQ2QL34 196 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 OR8B12Q8NGG6 310 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 CT55Q8WUE5 264 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 DNASE2BQ8WZ79 361 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 FRRS1LQ9P0K9 344 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 PILRAQ9UKJ1 303 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 SH2D7A6NKC9 451 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 FAM74A7A6NL05 159 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 PRSS1P07477 247 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 ZFP64Q9NPA5 681 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 DOK5Q9P104 306 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 PCM1Q15154 2024 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 MPZL1O95297 269 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 LTBRP36941 435 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 OR3A1P47881 315 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 ANKRD55Q3KP44 614 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 TSPO2Q5TGU0 170 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 PDPNQ86YL7 162 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 SFTPA2Q8IWL1 248 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 OR1L6Q8NGR2 347 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 WDR54Q9H977 334 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 TCFL5Q9UL49 500 aa10.8□□□□□ -0.68
NPLOC4-202ENST00000374747 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
NPLOC4-202ENST00000374747 F5H697 171 aa10.79□□□□□ -0.68
NPLOC4-202ENST00000374747 GEMIN2O14893 280 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-202ENST00000374747 CSN3P07498 182 aa10.79□□□□□ -0.68
NPLOC4-202ENST00000374747 FOXC1Q12948 553 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms