RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PRSS50Q9UI38 385 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 SEC16AO15027 2179 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 TRAV14DV4A0A0A6YYC5 116 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 A0A1W2PR80 420 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 DEFB108AA8MXU0 73 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-202ENST00000373779 IL2RAP01589 272 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 POC1AQ8NBT0 407 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 PLPPR2Q96GM1 343 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 GPR87Q9BY21 358 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 FCGR3BO75015 233 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 UNC119Q13432 240 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 ZADH2Q8N4Q0 377 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 PACRGQ96M98 296 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-202ENST00000373779 SPINK9Q5DT21 86 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 RFESDQ8TAC1 157 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 ABHD3Q8WU67 409 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 SNX22Q96L94 193 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 COMMD5Q9GZQ3 224 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 GBF1Q92538 1859 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 M0R1B8 84 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 TNFSF15O95150 251 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 MEOX1P50221 254 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 HABP2Q14520 560 aaPredicted RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 KHDC3LQ587J8 217 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 WDR54Q9H977 334 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 NGBQ9NPG2 151 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 FSCN3Q9NQT6 498 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 ZMAT5Q9UDW3 170 aaKnown RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 ERHP84090 104 aaKnown RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 OR10A7Q8NGE5 316 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 CTDSP1Q9GZU7 261 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 RANP62826 216 aaKnown RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 MRGPRFQ96AM1 343 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 NPIPB13A6NJU9 1138 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 NPIPB4C9JG80 1138 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 KRTDAPP60985 99 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 SUMO1P63165 101 aaKnown RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 FAM78BQ5VT40 261 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 DHRS7BQ6IAN0 325 aaPredicted RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 SPINK14Q6IE38 97 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 MRGPRGQ86SM5 289 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 ZNF383Q8NA42 475 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 A0A0J9YW62 118 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 PTBP3O95758 552 aaKnown RBP15.17■□□□□ 0.02
PTPRU-202ENST00000373779 TUSC5Q8IXB3 177 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 OR4A4PQ8NGN8 299 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 OR5B3Q8NH48 314 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 GFI1Q99684 422 aa15.17■□□□□ 0.02
PTPRU-202ENST00000373779 A0A087WV48 116 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 NUFIP2Q7Z417 695 aaKnown RBP15.16■□□□□ 0.02
PTPRU-202ENST00000373779 OR10AD1Q8NGE0 317 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 OR2T10Q8NGZ9 312 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 DVL1O14640 695 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 PSG2P11465 335 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 CCL4P13236 92 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 TOMM20LQ6UXN7 152 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 PRR32B1ATL7 298 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 OR5G3P0C626 314 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 PMELP40967 661 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 ID4P47928 161 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 UBE2V2Q15819 145 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 TMEM252Q8N6L7 170 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 CYB561D1Q8N8Q1 229 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 ANAPC16Q96DE5 110 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 RNF222A6NCQ9 220 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 H0Y8G0 127 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 BPIFB3P59826 476 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 RUNX1Q01196 453 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 OR5A2Q8NGI9 324 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 MRGPRDQ8TDS7 321 aa15.16■□□□□ 0.02
PTPRU-202ENST00000373779 IGHV3-43A0A0B4J1X8 118 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 IGHV3-43DP0DP04 118 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 ETV3LQ6ZN32 361 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 TMEM222Q9H0R3 208 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 TRAF3IP2O43734 574 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-202ENST00000373779 YIF1AO95070 293 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 ALKBH6Q3KRA9 238 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 TRAT1Q6PIZ9 186 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 LINC00596Q86U02 117 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 BSCL2Q96G97 398 aaPredicted RBP15.15■□□□□ 0.02
PTPRU-202ENST00000373779 HEXA-AS1Q9H8Q6 139 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 PARD6AQ9NPB6 346 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 CLEC1BQ9P126 229 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 MELTFP08582 738 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 BMP5P22003 454 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 ATRAIDQ6UW56 229 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 CPEB3Q8NE35 698 aaKnown RBP15.15■□□□□ 0.02
PTPRU-202ENST00000373779 OR10X1Q8NGY0 326 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 TPPP3Q9BW30 176 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 EGLN1Q9GZT9 426 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 PSG4Q00888 419 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 EIF4E3Q8N5X7 224 aaKnown RBP15.15■□□□□ 0.02
PTPRU-202ENST00000373779 POM121L2Q96KW2 1035 aa15.15■□□□□ 0.02
PTPRU-202ENST00000373779 MEX3AA1L020 520 aaKnown RBP15.14■□□□□ 0.01
PTPRU-202ENST00000373779 HIST1H3AP68431 136 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 DHRS11Q6UWP2 260 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 MYPOPQ86VE0 399 aaPredicted RBP15.14■□□□□ 0.01
PTPRU-202ENST00000373779 MOB3AQ96BX8 217 aa15.14■□□□□ 0.01
PTPRU-202ENST00000373779 MS4A10Q96PG2 267 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms