RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 OR5B12Q96R08 314 aa12.67□□□□□ -0.38
TOP3B-201ENST00000357179 TBX15Q96SF7 602 aa12.67□□□□□ -0.38
TOP3B-201ENST00000357179 PCED1AQ9H1Q7 454 aa12.67□□□□□ -0.38
TOP3B-201ENST00000357179 ZFP30Q9Y2G7 519 aa12.67□□□□□ -0.38
TOP3B-201ENST00000357179 A0A1W2PR77 199 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 TCF21O43680 179 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 TRAF3IP2O43734 574 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-201ENST00000357179 EFNA2O43921 213 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 TNFSF10P50591 281 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 ZNF133P52736 654 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-201ENST00000357179 IL22RA1Q8N6P7 574 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 ABHD14BQ96IU4 210 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 ATP5SQ99766 215 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 OR2J1Q9GZK6 312 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 OR6C3Q9NZP0 311 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 PRSS50Q9UI38 385 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 MYO7BQ6PIF6 2116 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 ADAMTS9Q9P2N4 1935 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
TOP3B-201ENST00000357179 IGLV3-32A0A0A0MS00 114 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 LMO7DNF2Z398 122 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 H7BYZ3 331 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 HRASP01112 189 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 TYMSP04818 313 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 ZNF41P51814 821 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-201ENST00000357179 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
TOP3B-201ENST00000357179 RRADP55042 308 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 PRSS8Q16651 343 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 HIST3H3Q16695 136 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
TOP3B-201ENST00000357179 MBD3L1Q8WWY6 194 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
TOP3B-201ENST00000357179 TNFSF13O75888 250 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 TMEM50AO95807 157 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 CD38P28907 300 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 WNT5AP41221 380 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 OR2V1Q8NHB1 315 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 GPR35Q9HC97 309 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 DNAJC4Q9NNZ3 241 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 PARD6AQ9NPB6 346 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 EXPH5Q8NEV8 1989 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 SHANK1Q9Y566 2161 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 A0A1W2PPQ1 181 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 SHISA7A6NL88 538 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 ZNF705FA8MVS1 300 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 RER1O15258 196 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 UMODP07911 640 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 ZNF705DP0CH99 300 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 ZNF705BP0CI00 300 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 UCP3P55916 312 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 MFAP5Q13361 173 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 DEFB133Q30KQ1 61 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 C16orf47Q6ZP98 133 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 PLXDC1Q8IUK5 500 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 CISD2Q8N5K1 135 aaKnown RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 CCDC71LQ8N9Z2 235 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 NFAM1Q8NET5 270 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 ZCCHC14Q8WYQ9 949 aaKnown RBP12.65□□□□□ -0.38
TOP3B-201ENST00000357179 MS4A10Q96PG2 267 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 IMMP2LQ96T52 175 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 ELOVL1Q9BW60 279 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 RPRMQ9NS64 109 aa12.65□□□□□ -0.38
TOP3B-201ENST00000357179 DTYMKP23919 212 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 CDAP32320 146 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 OPRM1P35372 400 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF154Q13106 437 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 TMEM241Q24JQ0 296 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 CXorf66Q5JRM2 361 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-201ENST00000357179 Q6ZSR3 168 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 Q96M66 194 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 SPIN2AQ99865 258 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 SPIN2BQ9BPZ2 258 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 GAL3ST2Q9H3Q3 398 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 PCDH15Q96QU1 1955 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 IGHV1OR21-1A0A087WYE8 117 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 CD27P26842 260 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 SRPXP78539 464 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF92Q03936 586 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-201ENST00000357179 IL24Q13007 206 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF726P1Q15940 193 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 NUFIP2Q7Z417 695 aaKnown RBP12.64□□□□□ -0.39
TOP3B-201ENST00000357179 MRGPRGQ86SM5 289 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 PP6455Q8WZ26 134 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 MOB3AQ96BX8 217 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 OXGR1Q96P68 337 aa12.64□□□□□ -0.39
TOP3B-201ENST00000357179 A0A0U1RQV5 110 aa12.63□□□□□ -0.39
TOP3B-201ENST00000357179 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
TOP3B-201ENST00000357179 CEBPZOSA8MTT3 80 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms