RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 RPL36Q9Y3U8 105 aaKnown RBP12.42□□□□□ -0.42
DDX55-202ENST00000354291 IGKV1-12A0A0C4DH73 117 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 SIRPB1O00241 398 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 IGKV1D-12P01611 117 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 HCKP08631 526 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 GBX2P52951 348 aaPredicted RBP12.41□□□□□ -0.42
DDX55-202ENST00000354291 HNF4GQ14541 408 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 PRAMEF5Q5TYX0 476 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 SLC35E3Q7Z769 313 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 FOXRED2Q8IWF2 684 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 STPG2Q8N412 459 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 PARP16Q8N5Y8 322 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 OR5AK2Q8NH90 309 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 CORO2AQ92828 525 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 SLC29A1Q99808 456 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
DDX55-202ENST00000354291 S100A14Q9HCY8 104 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 AMBNQ9NP70 447 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 MRPS18AQ9NVS2 196 aaKnown RBP12.41□□□□□ -0.42
DDX55-202ENST00000354291 FAM118AQ9NWS6 357 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 TAS2R3Q9NYW6 316 aa12.41□□□□□ -0.42
DDX55-202ENST00000354291 LINC01548A6NM66 108 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 TOR1AO14656 332 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 SULT1B1O43704 296 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 TMEM225BP0DP42 221 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 ZNF44P15621 663 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 CEACAM3P40198 252 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 VEGFCP49767 419 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 SCN1BQ07699 218 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 HES1Q14469 280 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 RBM39Q14498 530 aaKnown RBP12.4□□□□□ -0.42
DDX55-202ENST00000354291 KISS1Q15726 138 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 PNLIPRP3Q17RR3 467 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
DDX55-202ENST00000354291 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 HEPN1Q6WQI6 88 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 RTN4RL2Q86UN3 420 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 PQLC1Q8N2U9 271 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 DRAM1Q8N682 238 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 CPNE2Q96FN4 548 aaPredicted RBP12.4□□□□□ -0.42
DDX55-202ENST00000354291 TM2D3Q9BRN9 247 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 DHDHQ9UQ10 334 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 SIRT4Q9Y6E7 314 aaPredicted RBP12.4□□□□□ -0.42
DDX55-202ENST00000354291 ALMS1Q8TCU4 4167 aa12.4□□□□□ -0.42
DDX55-202ENST00000354291 BUB1B-PAK6H3BSN5 160 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 DEGS1O15121 323 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 LDLRAD4O15165 306 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 MAGEB3O15480 346 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 CSN2P05814 226 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 CDX1P47902 265 aaPredicted RBP12.39□□□□□ -0.43
DDX55-202ENST00000354291 INSL3P51460 131 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 AESQ08117 197 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 CCDC144NLQ6NUI1 221 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 TSEN15Q8WW01 171 aaKnown RBP12.39□□□□□ -0.43
DDX55-202ENST00000354291 RBMXL1Q96E39 390 aaKnown RBP12.39□□□□□ -0.43
DDX55-202ENST00000354291 PDCD1LG2Q9BQ51 273 aa12.39□□□□□ -0.43
DDX55-202ENST00000354291 KIAA2026Q5HYC2 2103 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 E9PI62 339 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 EBAG9O00559 213 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 CDK2P24941 298 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 GLIPR1P48060 266 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 MTNR1BP49286 362 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 KRBOX4Q5JUW0 171 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 ZNF691Q5VV52 312 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 LPCAT4Q643R3 524 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 Q6P435 159 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 ZNF555Q8NEP9 628 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 OR11H1Q8NG94 326 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 CREB3L1Q96BA8 519 aa12.38□□□□□ -0.43
DDX55-202ENST00000354291 ODAMA1E959 279 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
DDX55-202ENST00000354291 IGHG2P01859 326 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 SPNP16150 400 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 TMEM11P17152 192 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 RAB3AP20336 220 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 PRRX1P54821 245 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 ZP1P60852 638 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 GPR50Q13585 617 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 CDK5R1Q15078 307 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 ELP2Q6IA86 826 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 THNSL2Q86YJ6 484 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 PXT1Q8NFP0 134 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 OR56B4Q8NH76 319 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 RDH12Q96NR8 316 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 JAM3Q9BX67 310 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 ZNF286AQ9HBT8 521 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 OR6C3Q9NZP0 311 aa12.37□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A18PA6NE21 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A16PA6NEW6 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A20PA6NIJ5 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 ZNF729A6NN14 1252 aaPredicted RBP12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A9PA6NNJ1 464 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms