RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 STARD4Q96DR4 205 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 PRSS27Q9BQR3 290 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 SPINT1O43278 529 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 OR5G3P0C626 314 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 ERGIC1Q969X5 290 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 TRAF3IP2O43734 574 aaPredicted RBP14.11□□□□□ -0.15
NPHP3-201ENST00000337331 OR3A4PP47883 348 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 PMP22Q01453 160 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 CEBPEQ15744 281 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 PHYHD1Q5SRE7 291 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 SFTPA2Q8IWL1 248 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 OR6X1Q8NH79 312 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 KIAA1456Q9P272 454 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 CES1P1Q9UKY3 287 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 DHRS3O75911 302 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 THBS3P49746 956 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 MYPOPQ86VE0 399 aaPredicted RBP14.11□□□□□ -0.15
NPHP3-201ENST00000337331 Q9N2K0 584 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 OTOFQ9HC10 1997 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 K7ERU9 68 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 CNN1P51911 297 aaKnown RBP14.11□□□□□ -0.15
NPHP3-201ENST00000337331 ICAM5Q9UMF0 924 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 SPTBN1Q01082 2364 aaKnown RBP14.11□□□□□ -0.15
NPHP3-201ENST00000337331 F6UZH7 168 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 RAB29O14966 203 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 LINC00614P0C842 121 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 PATE4P0C8F1 98 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 IL9P15248 144 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 C1orf53Q5VUE5 145 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 SCCPDHQ8NBX0 429 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 RPS4Y2Q8TD47 263 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 OR2J1Q9GZK6 312 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 LIN7CQ9NUP9 197 aaKnown RBP14.11□□□□□ -0.15
NPHP3-201ENST00000337331 PSENENQ9NZ42 101 aa14.11□□□□□ -0.15
NPHP3-201ENST00000337331 CT45A8P0DMV1 189 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 CT45A9P0DMV2 189 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 ZNF32P17041 273 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 KIR2DL1P43626 348 aaPredicted RBP14.1□□□□□ -0.15
NPHP3-201ENST00000337331 GPM6AP51674 278 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 COL10A1Q03692 680 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 CT45A2Q5DJT8 189 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 C1QL4Q86Z23 238 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 R3HDM4Q96D70 268 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 AMBPP02760 352 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 GPR12P47775 334 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 RUNX1Q01196 453 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 FUT7Q11130 342 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 TRA2AQ13595 282 aaKnown RBP eCLIP14.1□□□□□ -0.15
NPHP3-201ENST00000337331 ZNF774Q6NX45 483 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 CADM4Q8NFZ8 388 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 IGHV1OR15-9A0A0B4J2B8 117 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 H0Y8G0 127 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 SOCS1O15524 211 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 PPP1CBP62140 327 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 APOBEC3DQ96AK3 386 aaPredicted RBP14.1□□□□□ -0.15
NPHP3-201ENST00000337331 HSPB9Q9BQS6 159 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 MFRPQ9BY79 579 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 CYTL1Q9NRR1 136 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 LTBP1Q14766 1721 aa14.1□□□□□ -0.15
NPHP3-201ENST00000337331 CLEC18AA5D8T8 446 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 PEBP1P30086 187 aaKnown RBP14.09□□□□□ -0.15
NPHP3-201ENST00000337331 C16orf82Q7Z2V1 217 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 SLC35E3Q7Z769 313 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 CLEC18CQ8NCF0 446 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 VOPP1Q96AW1 172 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 NEU1Q99519 415 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 GFI1Q99684 422 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 SMDT1Q9H4I9 107 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 AURKAIP1Q9NWT8 199 aaPredicted RBP14.09□□□□□ -0.15
NPHP3-201ENST00000337331 RIF1Q5UIP0 2472 aaKnown RBP14.09□□□□□ -0.15
NPHP3-201ENST00000337331 CRYAAP02489 173 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 ERVFRD-1P60508 538 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 ANKRD37Q7Z713 158 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 ALKBH7Q9BT30 221 aaPredicted RBP14.09□□□□□ -0.15
NPHP3-201ENST00000337331 A0A1W2PR80 420 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 TNFSF14O43557 240 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 OR4A8P0C604 315 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 GZMBP10144 247 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 AMTP48728 403 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 RBPJQ06330 500 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 MST1LQ2TV78 715 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 S100A7AQ86SG5 101 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 CDC20BQ86Y33 519 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 OR5AU1Q8NGC0 362 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 ADIPOR1Q96A54 375 aa14.09□□□□□ -0.15
NPHP3-201ENST00000337331 IGKV1-8A0A0C4DH67 115 aa14.08□□□□□ -0.15
NPHP3-201ENST00000337331 SNRNP200O75643 2136 aaKnown RBP14.08□□□□□ -0.15
NPHP3-201ENST00000337331 RAB35Q15286 201 aa14.08□□□□□ -0.15
NPHP3-201ENST00000337331 GINS3Q9BRX5 216 aa14.08□□□□□ -0.15
NPHP3-201ENST00000337331 NCOR1O75376 2440 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 KRASP01116 189 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 WNT5AP41221 380 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 LYZL2Q7Z4W2 148 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 TRIB1Q96RU8 372 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 SEMA5BQ9P283 1151 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 ATXN7O15265 892 aaPredicted RBP14.08□□□□□ -0.16
NPHP3-201ENST00000337331 CDC14BO60729 498 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 THY1P04216 161 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms