RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DHODHQ02127 395 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 NCMAPQ5T1S8 102 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 ZNF880Q6PDB4 577 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 UBALD1Q8TB05 177 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 RNASE6Q93091 150 aaKnown RBP15.48■□□□□ 0.07
USP39-201ENST00000323701 TOMM40LQ969M1 308 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 OR2A7Q96R45 310 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 COQ3Q9NZJ6 369 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 BET1O15155 118 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 SLC22A5O76082 557 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 PPP3CBP16298 524 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 AADACP22760 399 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 RBM39Q14498 530 aaKnown RBP15.48■□□□□ 0.07
USP39-201ENST00000323701 TMEM128Q5BJH2 165 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 FAHD2BQ6P2I3 314 aaPredicted RBP15.48■□□□□ 0.07
USP39-201ENST00000323701 ZNF497Q6ZNH5 498 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 CD177Q8N6Q3 437 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 MITD1Q8WV92 249 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 FAHD2AQ96GK7 314 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 RANBP3Q9H6Z4 567 aaPredicted RBP15.48■□□□□ 0.07
USP39-201ENST00000323701 DCAF16Q9NXF7 216 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 IGHV3OR15-7A0A075B7D8 119 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 SRRM5B3KS81 715 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 TRDCB7Z8K6 153 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 GLAP06280 429 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 PGAM2P15259 253 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 SEC61A1P61619 476 aaKnown RBP15.47■□□□□ 0.07
USP39-201ENST00000323701 SLC9A3R2Q15599 337 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 CLEC18BQ6UXF7 455 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 ZNF767PQ75MW2 155 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 GCM1Q9NP62 436 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 FLNCQ14315 2725 aa15.47■□□□□ 0.07
USP39-201ENST00000323701 TRBV6-6A0A0A6YYG2 114 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.46■□□□□ 0.07
USP39-201ENST00000323701 E7EQL1 145 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 LMO1P25800 156 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 CD34P28906 385 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 SELENOVP59797 346 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 SRSF7Q16629 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
USP39-201ENST00000323701 PRR7Q8TB68 274 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 CA5BP1Q8WTZ4 195 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 IGKV1D-17A0A075B6S4 117 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 MEX3AA1L020 520 aaKnown RBP15.46■□□□□ 0.07
USP39-201ENST00000323701 CCL8P80075 99 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 TNFAIP6P98066 277 aaPredicted RBP15.46■□□□□ 0.07
USP39-201ENST00000323701 ANKRD55Q3KP44 614 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 LDLRAD3Q86YD5 345 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 GAPTQ8N292 157 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 HEXA-AS1Q9H8Q6 139 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 OPN4Q9UHM6 478 aa15.46■□□□□ 0.07
USP39-201ENST00000323701 LOC105371267A0A1B0GV96 52 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 DUS4LO95620 317 aaKnown RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 LHBP01229 141 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 PSG2P11465 335 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 COL10A1Q03692 680 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 TFF3Q07654 80 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 MZT1Q08AG7 82 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 SURF2Q15527 256 aaPredicted RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 SMIM21Q3B7S5 101 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 KCTD9Q7L273 389 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 CCDC28AQ8IWP9 274 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 OR8H1Q8NGG4 311 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 COQ2Q96H96 371 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 SHARPINQ9H0F6 387 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 ERRFI1Q9UJM3 462 aaPredicted RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 EPG5Q9HCE0 2579 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 DSCAMO60469 2012 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 GIPP09681 153 aaPredicted RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 CFHR2P36980 270 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 GATA4P43694 442 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 OR3A1P47881 315 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 AESQ08117 197 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 LGALSLQ3ZCW2 172 aaPredicted RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 C11orf88Q6PI97 169 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 TPRX1Q8N7U7 411 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 OR11L1Q8NGX0 322 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 MOB3AQ96BX8 217 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 KIRREL1Q96J84 757 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 DHRS9Q9BPW9 319 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 RIMS4Q9H426 269 aaPredicted RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 ESRP2Q9H6T0 727 aaKnown RBP15.45■□□□□ 0.06
USP39-201ENST00000323701 IL19Q9UHD0 177 aa15.45■□□□□ 0.06
USP39-201ENST00000323701 IGKV1D-13A0A0B4J2D9 117 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 SFT2D2O95562 160 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 PPYP01298 95 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 ZNF728P0DKX0 622 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 IGKV1-13P0DP09 117 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 M6PRP20645 277 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 DNASE1P24855 282 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 TAS2R31P59538 309 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 SHEQ5VZ18 495 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 SSX8Q7RTT4 187 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 PRR18Q8N4B5 295 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 CITED4Q96RK1 184 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 ARID1AO14497 2285 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 ARFGEF3Q5TH69 2177 aa15.44■□□□□ 0.06
USP39-201ENST00000323701 DBX1A6NMT0 343 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 CYB5R3P00387 301 aaPredicted RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 CTSDP07339 412 aaPredicted RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 GNLYP22749 145 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms