RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 OR5D13Q8NGL4 314 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 OR5C1Q8NGR4 320 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 GTF3AQ92664 365 aaKnown RBP7.46□□□□□ -1.22
CLK1-201ENST00000321356 SLAMF9Q96A28 289 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
CLK1-201ENST00000321356 LINC00470Q9BZP3 86 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 UNKLQ9H9P5 680 aaKnown RBP7.46□□□□□ -1.22
CLK1-201ENST00000321356 PRDM6Q9NQX0 595 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 CRIM1Q9NZV1 1036 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 SIT1Q9Y3P8 196 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 RNF115Q9Y4L5 304 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 PCSK5Q92824 1860 aa7.46□□□□□ -1.22
CLK1-201ENST00000321356 COL27A1Q8IZC6 1860 aaPredicted RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 A0A087WWC5 75 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 A0A1B0GV50 99 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 PINLYPA6NC86 204 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 AP4M1O00189 453 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 HSD17B6O14756 317 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 COX5BP10606 129 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 EPHA1P21709 976 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 OMGP23515 440 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 DYNLT3P51808 116 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 PAX9P55771 341 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 OR8G1Q15617 311 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 CEACAM21Q3KPI0 293 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 SPIN3Q5JUX0 258 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ZNF506Q5JVG8 444 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ACER2Q5QJU3 275 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ADAM5Q6NVV9 412 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 SLC23A3Q6PIS1 610 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 BATF2Q8N1L9 274 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ZFP62Q8NB50 900 aaPredicted RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 TCEAL3Q969E4 200 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 MUCL1Q96DR8 90 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ZNF845Q96IR2 970 aaPredicted RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 MAGT1Q9H0U3 335 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 GSN-AS1Q9NRJ2 163 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 MTCH1Q9NZJ7 389 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 TAAR3PQ9P1P4 343 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ATP23Q9Y6H3 246 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 VPS13AQ96RL7 3174 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 FREM1Q5H8C1 2179 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 H3BQ15 152 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 PPIHO43447 177 aaKnown RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 TRAPPC6AO75865 159 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 CST7O76096 145 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 OR2C1O95371 312 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 HSPB1P04792 205 aaKnown RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 WNT2P09544 360 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ZNF806P0C7X5 589 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 HAAOP46952 286 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 DUSP3P51452 185 aaPredicted RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 GPM6AP51674 278 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 VAMP2P63027 116 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ARF1P84077 181 aaKnown RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 IL24Q13007 206 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ICAM4Q14773 271 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 PCSK4Q6UW60 755 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 DPPA3Q6W0C5 159 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 MKXQ8IYA7 352 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 ZDHHC23Q8IYP9 409 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 IL22RA1Q8N6P7 574 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 GPHA2Q96T91 129 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 RIMS4Q9H426 269 aaPredicted RBP7.45□□□□□ -1.22
CLK1-201ENST00000321356 CCL28Q9NRJ3 127 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 IL36RNQ9UBH0 155 aa7.45□□□□□ -1.22
CLK1-201ENST00000321356 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLK1-201ENST00000321356 DOCK10Q96BY6 2186 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 TRAV1-1A0A0B4J248 108 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 B4E171 279 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 CHST1O43916 411 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 MRPL33O75394 65 aaKnown RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 CLN5O75503 358 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 PGLYRP1O75594 196 aaPredicted RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 IFNA17P01571 189 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 IGHV3-9P01782 118 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 CFIP05156 583 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 FABP1P07148 127 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 SLC25A6P12236 298 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 NQO2P16083 231 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 F2RP25116 425 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 GDF1P27539 372 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 EIF2S3P41091 472 aaKnown RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 TSPAN7P41732 249 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 TAS2R30P59541 319 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 OR2B8PP59922 312 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 RPS18P62269 152 aaKnown RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 RUNX1Q01196 453 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 HAGHQ16775 308 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 ZNF880Q6PDB4 577 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 LINC00596Q86U02 117 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 CMTM1Q8IZ96 169 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 MRPL30Q8TCC3 161 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms