RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MRGPRDQ8TDS7 321 aa13.8□□□□□ -0.2
EXOSC4-201ENST00000316052 BARHL1Q9BZE3 327 aa13.8□□□□□ -0.2
EXOSC4-201ENST00000316052 AMBNQ9NP70 447 aa13.8□□□□□ -0.2
EXOSC4-201ENST00000316052 PCDHB16Q9NRJ7 776 aa13.8□□□□□ -0.2
EXOSC4-201ENST00000316052 LINC00527Q9UJ94 153 aa13.8□□□□□ -0.2
EXOSC4-201ENST00000316052 AMMECR1Q9Y4X0 333 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-201ENST00000316052 IL1AP01583 271 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 TMEM11P17152 192 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 C21orf33P30042 268 aaPredicted RBP13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 THBS3P49746 956 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 MADCAM1Q13477 382 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 HES1Q14469 280 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 OR2W3Q7Z3T1 314 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 SATL1Q86VE3 508 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 Q8NFD4 153 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 OR10K1Q8NGX5 313 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 ERVK13-1Q9NX77 482 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 DHDHQ9UQ10 334 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 ORC6Q9Y5N6 252 aa13.79□□□□□ -0.2
EXOSC4-201ENST00000316052 A0A1W2PPE3 182 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 LINC01548A6NM66 108 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 TMEM212A6NML5 194 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 SNTNA6NMZ2 147 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 H3BNX3 289 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 GABRPO00591 440 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 SSTR5P35346 364 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 GNG10P50151 68 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 ALDH3A2P51648 485 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 PAX5Q02548 391 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 IL13RA2Q14627 380 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 C8orf86Q6ZUL3 223 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 HAVCR2Q8TDQ0 301 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 CHPT1Q8WUD6 406 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 TNFAIP8L1Q8WVP5 186 aa13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 RGP1Q92546 391 aaPredicted RBP13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 MRPL48Q96GC5 212 aaKnown RBP13.78□□□□□ -0.2
EXOSC4-201ENST00000316052 SERPINE3A8MV23 424 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 FGF16O43320 207 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 IGKV1D-33P01593 117 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 IGKV1-33P01594 117 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 CCDC159P0C7I6 412 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 RAB3AP20336 220 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 RAB7AP51149 207 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 GTF2A1P52655 376 aaPredicted RBP13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 OR8H3Q8N146 312 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 CBR4Q8N4T8 237 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 OR51D1Q8NGF3 324 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 RHOXF1Q8NHV9 184 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 TSEN15Q8WW01 171 aaKnown RBP13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 GPER1Q99527 375 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 GMPPBQ9Y5P6 360 aa13.77□□□□□ -0.21
EXOSC4-201ENST00000316052 CDRT1O95170 752 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 HTR3BO95264 441 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 FADS2O95864 444 aaKnown RBP13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 IGHG2P01859 326 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 SOX2P48431 317 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 RSU1Q15404 277 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 ZFP1Q6P2D0 407 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 SLC16A12Q6ZSM3 486 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 SUMF2Q8NBJ7 301 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 OR10A7Q8NGE5 316 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 OR52I1Q8NGK6 324 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 OR10X1Q8NGY0 326 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 P2RX4Q99571 388 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 DPCDQ9BVM2 203 aaPredicted RBP13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 ZFP57Q9NU63 452 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 TAS2R4Q9NYW5 299 aa13.76□□□□□ -0.21
EXOSC4-201ENST00000316052 IGHV3-72A0A0B4J1Y9 119 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 RPSAP08865 295 aaKnown RBP13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 MYCNOSP40205 109 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 REG1BP48304 166 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 KCNJ3P48549 501 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 GBX2P52951 348 aaPredicted RBP13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 EBI3Q14213 229 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 XAF1Q6GPH4 301 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 DUX3Q96PT4 197 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 MYCBPQ99417 103 aaPredicted RBP13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 B9D2Q9BPU9 175 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 JAM3Q9BX67 310 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 GPR61Q9BZJ8 451 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 FAM192AQ9GZU8 254 aa13.75□□□□□ -0.21
EXOSC4-201ENST00000316052 STAB2Q8WWQ8 2551 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 IGHV1-3A0A0C4DH29 117 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 NUDT19A8MXV4 375 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 HSD17B6O14756 317 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 MAGEB3O15480 346 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 LIMS3P0CW19 117 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 LIMS4P0CW20 117 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 VSIG8P0DPA2 414 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 CD69Q07108 199 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 ZNF816Q0VGE8 651 aaPredicted RBP13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 RAB40BQ12829 278 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 MRPL28Q13084 256 aaKnown RBP13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 MOB3BQ86TA1 216 aa13.74□□□□□ -0.21
EXOSC4-201ENST00000316052 STPG2Q8N412 459 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms