RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 NARFLQ9H6Q4 476 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 POLEQ07864 2286 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 NUP210LQ5VU65 1888 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 DNM1P46Q6ZS02 220 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 OR1L8Q8NGR8 309 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 OR5M11Q96RB7 305 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ACACAQ13085 2346 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 HBZP02008 142 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CD74P04233 296 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ZNF90Q03938 601 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TRIM61Q5EBN2 209 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 CARD17Q5XLA6 110 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 TRNP1Q6NT89 227 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 SPPL3Q8TCT6 385 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 ADAMTS17Q8TE56 1095 aa3.55□□□□□ -1.84
USH2A-201ENST00000307340 WSB2Q9NYS7 404 aaPredicted RBP3.55□□□□□ -1.84
USH2A-201ENST00000307340 C7orf71A4D174 169 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 MUC1P15941 1255 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 SEC11AP67812 179 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZIC1Q15915 447 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 KCNS1Q96KK3 526 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 LY96Q9Y6Y9 160 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 AKR1C3P42330 323 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 FBXW9Q5XUX1 488 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 IL20RBQ6UXL0 311 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ATG4DQ86TL0 474 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 ASB10Q8WXI3 467 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 CDX2Q99626 313 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 P2RY10O00398 339 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 CNIH1O95406 144 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 Q6ZS49 121 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 MOB3CQ70IA8 216 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 SLC16A13Q7RTY0 426 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 TSPOP30536 169 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 HOXD11P31277 338 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 PPP1R8Q12972 351 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 PRAMEF5Q5TYX0 476 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 PRAMEF6Q5VXH4 476 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 NUDT22Q9BRQ3 303 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 AKIRIN1Q9H9L7 192 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZFP64Q9NPA5 681 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 C9JVG2 144 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZNF205O95201 554 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 SNRPBP14678 240 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR3A1P47881 315 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 SLC35B1P78383 322 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 TWIST1Q15672 202 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZNF439Q8NDP4 499 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ELOVL5Q9NYP7 299 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 CDX4O14627 284 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 PRTGQ2VWP7 1150 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZNF385CQ66K41 422 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 LEMD1Q68G75 181 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 C2orf73Q8N5S3 287 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR10J6PQ8NGY7 276 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 FBXO27Q8NI29 283 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 VN1R17PQ8TDU5 208 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 TBC1D29Q9UFV1 150 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR7C2O60412 319 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 TMEM33P57088 247 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 NUTF2P61970 127 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 HOGA1Q86XE5 327 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZNF2Q9BSG1 426 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR2M5A3KFT3 312 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 WTIPA6NIX2 430 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 PPM1DO15297 605 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 LYPD1Q8N2G4 141 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR4C5Q8NGB2 326 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 PARD6GQ9BYG4 376 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 NCOA6Q14686 2063 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 OTX2P32243 289 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ST3GAL2Q16842 350 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR2G6Q5TZ20 316 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZNF519Q8TB69 540 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 PMEPA1Q969W9 287 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 FAM131CQ96AQ9 280 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 BMPR1BO00238 502 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 SYNGR2O43760 224 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 LIMS1P48059 325 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 RPL8P62917 257 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 FA2HQ7L5A8 372 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 MEX3DQ86XN8 651 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 OR52M1Q8NGK5 317 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 OSR1Q8TAX0 266 aaPredicted RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 MBD3L1Q8WWY6 194 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 RND1Q92730 232 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 HINT2Q9BX68 163 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 LIN28AQ9H9Z2 209 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 FAM227AF5H4B4 570 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 M0R1X1 148 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 PPYP01298 95 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 BCL2P10415 239 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 SELENOHQ8IZQ5 122 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 MS4A3Q96HJ5 214 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 ZMIZ1Q9ULJ6 1067 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 CARHSP1Q9Y2V2 147 aaKnown RBP3.54□□□□□ -1.84
USH2A-201ENST00000307340 B4GALT3O60512 393 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 RHBDL1O75783 438 aa3.54□□□□□ -1.84
USH2A-201ENST00000307340 C10orf128Q5T292 105 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms