RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 A0A1B0GU03 582 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 A0A1B0GW64 132 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 H7BYZ3 331 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 SLC10A1Q14973 349 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 CST9LP1Q5W188 147 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-201ENST00000300527 TMEM183AQ8IXX5 376 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 ABCA7Q8IZY2 2146 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 IGKV1D-13A0A0B4J2D9 117 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 A0A1W2PNV4 684 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 CDS2O95674 445 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 IGHV3-9P01782 118 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 IGKV1-13P0DP09 117 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 B4GALT1P15291 398 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 TCN2P20062 427 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 LMO1P25800 156 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 FASLGP48023 281 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 TAS2R30P59541 319 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 RSPO1Q2MKA7 263 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-201ENST00000300527 OR8G2PQ6IF36 304 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 RBKSQ9H477 322 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 TRAV39A0A0B4J263 110 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 DHHO43323 396 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 DTYMKP23919 212 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 CNN3Q15417 329 aaKnown RBP12.65□□□□□ -0.38
COL6A2-201ENST00000300527 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-201ENST00000300527 C2orf88Q9BSF0 95 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
COL6A2-201ENST00000300527 A0A1B0GUS0 222 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 CD33P20138 364 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 SSX7Q7RTT5 188 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 EXTL1Q92935 676 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 LHX4Q969G2 390 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 V9GYS6 101 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 A6NNC1 897 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 PDCD6O75340 191 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 SERPINE2P07093 398 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 GALR1P47211 349 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 SPANXN5Q5MJ07 72 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 C9orf135Q5VTT2 229 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 C8orf33Q9H7E9 229 aaPredicted RBP12.64□□□□□ -0.39
COL6A2-201ENST00000300527 Q9N2K0 584 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 CPAMD8Q8IZJ3 1885 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 A0A1W2PPC4 97 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 OPN1MWP04001 364 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 POU2F2P09086 479 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 OPN1MW2P0DN77 364 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 OPN1MW3P0DN78 364 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 LRTM2Q8N967 370 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 ANGPTL4Q9BY76 406 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 MRPL37Q9BZE1 423 aaKnown RBP12.64□□□□□ -0.39
COL6A2-201ENST00000300527 IL36RNQ9UBH0 155 aa12.64□□□□□ -0.39
COL6A2-201ENST00000300527 C5orf67F2Z3F1 127 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-201ENST00000300527 CHRNA7P36544 502 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 Q6ZPA2 131 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 SGCZQ96LD1 299 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 SLC25A22Q9H936 323 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 A0A0G2JRQ6 117 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 MAP1LC3B2A6NCE7 125 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 NPIPB13A6NJU9 1138 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF732B4DXR9 585 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 NPIPB4C9JG80 1138 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
COL6A2-201ENST00000300527 PAX5Q02548 391 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF468Q5VIY5 522 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-201ENST00000300527 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 SLC39A9Q9NUM3 307 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 A0A0U1RQV5 110 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 PMP22Q01453 160 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 FOXO1Q12778 655 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 HLA-BQ31612 363 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 ANKRD37Q7Z713 158 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 ODF3L1Q8IXM7 274 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 PHOSPHO2Q8TCD6 241 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 DEFB126Q9BYW3 111 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 DECR2Q9NUI1 292 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 PRSS50Q9UI38 385 aa12.63□□□□□ -0.39
COL6A2-201ENST00000300527 WDFY3Q8IZQ1 3526 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 LILRA5A6NI73 299 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF737O75373 536 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 FAM3BP58499 235 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-201ENST00000300527 OR5R1Q8NH85 324 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 SPSB1Q96BD6 273 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
COL6A2-201ENST00000300527 TP53TG5Q9Y2B4 290 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 LRRC3CA6NJW4 275 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 B4DEV8 164 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 DEFA4P12838 97 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 EGR1P18146 543 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 GZMHP20718 246 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 DRD1P21728 446 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 WNT5AP41221 380 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 SRPXP78539 464 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms