RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 MGAT2Q10469 447 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 NSUN5P2Q63ZY6 315 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 RPS4Y1P22090 263 aaKnown RBP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 ACAA2P42765 397 aaKnown RBP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 TGIF1Q15583 401 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 PRSS54Q6PEW0 395 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 CHST1O43916 411 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 DUSP18Q8NEJ0 188 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 OR4D10Q8NGI6 311 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 RD3LP0DJH9 198 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 SSMEM1Q8WWF3 244 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 COL4A1P02462 1669 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 SYNGR2O43760 224 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 PPYP01298 95 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 RPL13AP40429 203 aaKnown RBP15.11■□□□□ 0.01
SHANK1-201ENST00000293441 MPV17LQ2QL34 196 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 SLC26A10Q8NG04 563 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 OR1L1Q8NH94 360 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 PRSS3P2Q8NHM4 247 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 Q8WTZ3 238 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 RABAC1Q9UI14 185 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 MMP24Q9Y5R2 645 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 RPL31P62899 125 aaKnown RBP15.11■□□□□ 0.01
SHANK1-201ENST00000293441 MMDQ15546 238 aa15.11■□□□□ 0.01
SHANK1-201ENST00000293441 KIAA1324LA8MWY0 1029 aaPredicted RBP15.1■□□□□ 0.01
SHANK1-201ENST00000293441 ZNF154Q13106 437 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 DTD1Q8TEA8 209 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 A0A1W2PNV4 684 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 TMEM37Q8WXS4 190 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 CLEC18BQ6UXF7 455 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 ZNF561Q8N587 486 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 MRGPRFQ96AM1 343 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 ADAT3Q96EY9 351 aaPredicted RBP15.1■□□□□ 0.01
SHANK1-201ENST00000293441 WIPI2Q9Y4P8 454 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 C10orf111Q8N326 155 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 RNF133Q8WVZ7 376 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 SCN4AP35499 1836 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 RNF2Q99496 336 aa15.1■□□□□ 0.01
SHANK1-201ENST00000293441 ZNFX1Q9P2E3 1918 aaKnown RBP15.09■□□□□ 0.01
SHANK1-201ENST00000293441 DNPH1O43598 174 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 SLC6A1P30531 599 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 PRDX2P32119 198 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 RNF151Q2KHN1 245 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 CHODLQ9H9P2 273 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 HILPDAQ9Y5L2 63 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 NINQ8N4C6 2090 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 IGKV1-8A0A0C4DH67 115 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 CAMPP49913 170 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 TMEM33P57088 247 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 ZNF66Q6ZN08 573 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 FAM214BQ7L5A3 538 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 OR4P4Q8NGL7 312 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 SAP25Q8TEE9 199 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 CCL13Q99616 98 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 ATP5SQ99766 215 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 TECRQ9NZ01 308 aaKnown RBP15.09■□□□□ 0.01
SHANK1-201ENST00000293441 LPAR3Q9UBY5 353 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 PRSS50Q9UI38 385 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 IL24Q13007 206 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 PSG5Q15238 335 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 TUSC1Q2TAM9 212 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 BRWD3Q6RI45 1802 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 C9orf172C9J069 976 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 RPL36A-HNRNPH2H7BZ11 118 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 UCP2P55851 309 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 ATP1A1-AS1Q5TC04 95 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 ZPLD1Q8TCW7 415 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 TRAV8-7A0A075B6U6 113 aa15.09■□□□□ 0.01
SHANK1-201ENST00000293441 RPL30P62888 115 aaKnown RBP15.09■□□□□ 0.01
SHANK1-201ENST00000293441 NXF2Q9GZY0 626 aaKnown RBP15.09■□□□□ 0.01
SHANK1-201ENST00000293441 C19orf57Q0VDD7 668 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 LINC00596Q86U02 117 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 CHST5Q9GZS9 411 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 SLC7A10Q9NS82 523 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 PRNDQ9UKY0 176 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 RGPD3A6NKT7 1758 aaPredicted RBP15.08■□□□□ 0.01
SHANK1-201ENST00000293441 CLDN14O95500 239 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 HPXP02790 462 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 CSF2RBP32927 897 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 HIST1H3AP68431 136 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 NHLH1Q02575 133 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 NHLH2Q02577 135 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 C5orf17Q8NAS9 161 aa15.08■□□□□ 0.01
SHANK1-201ENST00000293441 FGF5P12034 268 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 HLA-GP17693 338 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 MOGAT2Q3SYC2 334 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 HDHD3Q9BSH5 251 aaPredicted RBP15.08■□□□□ 0
SHANK1-201ENST00000293441 OR2W1Q9Y3N9 320 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 SCGB1C2P0DMR2 95 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 PSG4Q00888 419 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 UQCC3Q6UW78 93 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 OR8I2Q8N0Y5 310 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 OR4X1Q8NH49 305 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 OR2V2Q96R30 315 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 OR4C45A6NMZ5 311 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 SYNGR1O43759 233 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 PPP1CCP36873 323 aaKnown RBP15.08■□□□□ 0
SHANK1-201ENST00000293441 KCNMB1Q16558 191 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 FAM78BQ5VT40 261 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 TMEM167BQ9NRX6 74 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms