RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 IGHA2P01877 340 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 PPP1CCP36873 323 aaKnown RBP16.74■□□□□ 0.27
LSM11-201ENST00000286307 OR5AP2Q8NGF4 316 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 NAA60Q9H7X0 242 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 RXFP4Q8TDU9 374 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 PPP1R1CQ8WVI7 109 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 NPAP1Q9NZP6 1156 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 PGA4P0DJD7 388 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 PGA3P0DJD8 388 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 TMED3Q9Y3Q3 217 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 CCL27Q9Y4X3 112 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 AUP1Q9Y679 476 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 IGLV3-19P01714 112 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 SMIM18P0DKX4 95 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 HLA-DRB3P79483 266 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 SMIM4Q8WVI0 70 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 RNF133Q8WVZ7 376 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 IFNL4K9M1U5 179 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 ADAM10O14672 748 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 GABRB1P18505 474 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 H3F3CQ6NXT2 135 aa16.74■□□□□ 0.27
LSM11-201ENST00000286307 CEBPDP49716 269 aaPredicted RBP16.73■□□□□ 0.27
LSM11-201ENST00000286307 PRDM14Q9GZV8 571 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 SVILO95425 2214 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 LALBAP00709 142 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 LCN2P80188 198 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 MRPL22Q9NWU5 206 aaKnown RBP16.73■□□□□ 0.27
LSM11-201ENST00000286307 FOXH1O75593 365 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 ASAH1Q13510 395 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 MPV17LQ2QL34 196 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 C4orf51C9J302 202 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 TMEM127O75204 238 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 MARC2Q969Z3 335 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 ZPLD1Q8TCW7 415 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 GHITMQ9H3K2 345 aa16.73■□□□□ 0.27
LSM11-201ENST00000286307 MGAT2Q10469 447 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 TBR1Q16650 682 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 ATP5SQ99766 215 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 ABCA7Q8IZY2 2146 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 APC2O95996 2303 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 ID1P41134 155 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 TNFSF10P50591 281 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 CEACAM21Q3KPI0 293 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 GPR137Q96N19 417 aa16.72■□□□□ 0.27
LSM11-201ENST00000286307 G6PCP35575 357 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 SCN5AQ14524 2016 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 SLC7A5P1Q8MH63 180 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 OR8I2Q8N0Y5 310 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 OR8G5Q8NG78 346 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 SYNGR1O43759 233 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 LINC00596Q86U02 117 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 KLF14Q8TD94 323 aaPredicted RBP16.71■□□□□ 0.27
LSM11-201ENST00000286307 CABLES2Q9BTV7 478 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 CTDSP1Q9GZU7 261 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 PITPNC1Q9UKF7 332 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 IGHV3OR16-12A0A075B7B8 117 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 ERVFC1-1P60608 527 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 RNFT1Q5M7Z0 435 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 RAB40CQ96S21 281 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 WDR61Q9GZS3 305 aaKnown RBP16.71■□□□□ 0.27
LSM11-201ENST00000286307 CHST5Q9GZS9 411 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 CLEC12BQ2HXU8 276 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 SLC25A42Q86VD7 318 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 GAPTQ8N292 157 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 GON7Q9BXV9 100 aa16.71■□□□□ 0.27
LSM11-201ENST00000286307 ZNF703Q9H7S9 590 aaPredicted RBP16.71■□□□□ 0.27
LSM11-201ENST00000286307 BSPH1Q075Z2 132 aa16.71■□□□□ 0.26
LSM11-201ENST00000286307 CCL28Q9NRJ3 127 aa16.71■□□□□ 0.26
LSM11-201ENST00000286307 METTL1Q9UBP6 276 aaKnown RBP16.71■□□□□ 0.26
LSM11-201ENST00000286307 LILRB1Q8NHL6 650 aaPredicted RBP16.7■□□□□ 0.26
LSM11-201ENST00000286307 VSIG4Q9Y279 399 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 TGFAP01135 160 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 CFHR1Q03591 330 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 ADAT3Q96EY9 351 aaPredicted RBP16.7■□□□□ 0.26
LSM11-201ENST00000286307 SMIM7Q9BQ49 75 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 NUP214P35658 2090 aaPredicted RBP16.7■□□□□ 0.26
LSM11-201ENST00000286307 RAB29O14966 203 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 DXOO77932 396 aaKnown RBP16.7■□□□□ 0.26
LSM11-201ENST00000286307 LEUTXA8MZ59 168 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 H7BYZ3 331 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 NDUFA2O43678 99 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 B3GALNT1O75752 331 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 CDKN1AP38936 164 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 ZDHHC22Q8N966 263 aa16.7■□□□□ 0.26
LSM11-201ENST00000286307 ASXL3Q9C0F0 2248 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 CRHP06850 196 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 ASAH2BP0C7U1 165 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 SUCLG1P53597 346 aaKnown RBP16.69■□□□□ 0.26
LSM11-201ENST00000286307 TPPP2P59282 170 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 LSM11P83369 360 aaKnown RBP eCLIP16.69■□□□□ 0.26
LSM11-201ENST00000286307 ZNF552Q9H707 407 aaPredicted RBP16.69■□□□□ 0.26
LSM11-201ENST00000286307 PAX5Q02548 391 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 SCARB1Q8WTV0 552 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 POM121Q96HA1 1249 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 ANXA10Q9UJ72 324 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 SFT2D2O95562 160 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 HOXB1P14653 301 aaPredicted RBP16.69■□□□□ 0.26
LSM11-201ENST00000286307 STARD4Q96DR4 205 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 PRNDQ9UKY0 176 aa16.69■□□□□ 0.26
LSM11-201ENST00000286307 BOLA1Q9Y3E2 137 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms