RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ATP5SQ99766 215 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 MMP24Q9Y5R2 645 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 CLDN34H7C241 214 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 ADAP1O75689 374 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 CCDC144NLQ6NUI1 221 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 DOLPP1Q86YN1 238 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 RASL11BQ9BPW5 248 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 LEUTXA8MZ59 168 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 GNG4P50150 75 aa20.23■□□□□ 0.83
TARBP1-201ENST00000040877 A0A1W2PNV4 684 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 SLC31A2O15432 143 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 ROM1Q03395 351 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 WNT2BQ93097 391 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 OR2J1Q9GZK6 312 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 ZNF737O75373 536 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 RPS4Y1P22090 263 aaKnown RBP20.22■□□□□ 0.83
TARBP1-201ENST00000040877 ADIPOR1Q96A54 375 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 OR1A1Q9P1Q5 309 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 MIA3Q5JRA6 1907 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 PPIAL4EA0A075B759 164 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 PPIAL4DF5H284 164 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 PPIAL4FP0DN26 164 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 RBM11P57052 281 aaKnown RBP20.22■□□□□ 0.83
TARBP1-201ENST00000040877 CEACAM21Q3KPI0 293 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 ZNF260Q3ZCT1 412 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 MYPOPQ86VE0 399 aaPredicted RBP20.22■□□□□ 0.83
TARBP1-201ENST00000040877 FLYWCH2Q96CP2 140 aaKnown RBP20.22■□□□□ 0.83
TARBP1-201ENST00000040877 CCL28Q9NRJ3 127 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 TECRQ9NZ01 308 aaKnown RBP20.22■□□□□ 0.83
TARBP1-201ENST00000040877 PPIAL4AQ9Y536 164 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 INSIG2Q9Y5U4 225 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 PSG4Q00888 419 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 TEX30Q5JUR7 227 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 SLC24A4Q8NFF2 622 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 Q9N2K0 584 aa20.22■□□□□ 0.83
TARBP1-201ENST00000040877 RGPD3A6NKT7 1758 aaPredicted RBP20.21■□□□□ 0.83
TARBP1-201ENST00000040877 RBBP6Q7Z6E9 1792 aaKnown RBP20.21■□□□□ 0.83
TARBP1-201ENST00000040877 SCN10AQ9Y5Y9 1956 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 A0A1B0GU03 582 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 IGLV3-21P80748 117 aaPredicted RBP20.21■□□□□ 0.83
TARBP1-201ENST00000040877 DPF1Q92782 380 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 MEOX2P50222 304 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 KLF9Q13886 244 aaPredicted RBP20.21■□□□□ 0.83
TARBP1-201ENST00000040877 RIPPLY2Q5TAB7 128 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 MS4A18H0YCH9 400 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 MS4A18Q3C1V0 323 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 MANBALQ9NQG1 85 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 KCNMB2Q9Y691 235 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 HSBP1O75506 76 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 PGA4P0DJD7 388 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 KIR3DL2P43630 455 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 PIGYQ3MUY2 71 aa20.21■□□□□ 0.83
TARBP1-201ENST00000040877 XIRP1Q702N8 1843 aaKnown RBP20.2■□□□□ 0.83
TARBP1-201ENST00000040877 IFNL4K9M1U5 179 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 KCNK17Q96T54 332 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 TMPRSS5Q9H3S3 457 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 WIPI2Q9Y4P8 454 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 FUT5Q11128 374 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 ZPLD1Q8TCW7 415 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 CTHRC1Q96CG8 243 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 NXF2Q9GZY0 626 aaKnown RBP20.2■□□□□ 0.82
TARBP1-201ENST00000040877 INPP5JQ15735 1006 aaPredicted RBP20.2■□□□□ 0.82
TARBP1-201ENST00000040877 SLC25A47Q6Q0C1 308 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 MSL2Q9HCI7 577 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 SLC7A10Q9NS82 523 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 NINQ8N4C6 2090 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 UCP2P55851 309 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 SMUG1Q53HV7 270 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 ZNF519Q8TB69 540 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 DSPPQ9NZW4 1301 aa20.2■□□□□ 0.82
TARBP1-201ENST00000040877 PARP14Q460N5 1801 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 FA2HQ7L5A8 372 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 MARS2Q96GW9 593 aaKnown RBP20.19■□□□□ 0.82
TARBP1-201ENST00000040877 IGSF11Q5DX21 431 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 TRAF4Q9BUZ4 470 aaPredicted RBP20.19■□□□□ 0.82
TARBP1-201ENST00000040877 GOLT1BQ9Y3E0 138 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 UNC13CQ8NB66 2214 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 MGST3O14880 152 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 IGHV3-13P01766 116 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 IGHV3-7P01780 117 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 OR4D10Q8NGI6 311 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 NKX2-8O15522 239 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 CHST1O43916 411 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 CELA2AP08217 269 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 ZNF883P0CG24 379 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 G0S2P27469 103 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 TPPP2P59282 170 aa20.19■□□□□ 0.82
TARBP1-201ENST00000040877 SYNGR1O43759 233 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 ALX4Q9H161 411 aaPredicted RBP20.18■□□□□ 0.82
TARBP1-201ENST00000040877 SLC25A22Q9H936 323 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 SCN3AQ9NY46 2000 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 DNASE2O00115 360 aaPredicted RBP20.18■□□□□ 0.82
TARBP1-201ENST00000040877 GNG7O60262 68 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 DYNLT3P51808 116 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 LYZP61626 148 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 OR10D4PQ8NGN7 298 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 LINC00052Q96N35 136 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 MYO16Q9Y6X6 1858 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A10PA6NDY2 464 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 508.2 ms