RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HSPB6O14558 160 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 GPR37O15354 613 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 HIST1H1DP16402 221 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 IL2RGP31785 369 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 ARL6IP1Q15041 203 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 GRK1Q15835 563 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 WDR25Q64LD2 544 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 SULT4A1Q9BR01 284 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 PECRQ9BY49 303 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 CHST6Q9GZX3 395 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 CLN8Q9UBY8 286 aa16.45■□□□□ 0.22
PDLIM2-221ENST00000622702 FAM25AB3EWG3 89 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 FAM25CB3EWG5 89 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 FAM25GB3EWG6 89 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 MFNGO00587 321 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 IGHV4-31P0DP07 118 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 SEC61A1P61619 476 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 C11orf91Q3C1V1 193 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 ESCO2Q56NI9 601 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 BRICD5Q6PL45 260 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 RTN4RL2Q86UN3 420 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 BPIFB2Q8N4F0 458 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 ST8SIA4Q92187 359 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 SSBP3Q9BWW4 388 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 KCNK7Q9Y2U2 307 aa16.44■□□□□ 0.22
PDLIM2-221ENST00000622702 ABCA1O95477 2261 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 A8MXK9 166 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 CA11O75493 328 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 ERP29P30040 261 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 TNFSF8P32971 234 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 S100A5P33763 92 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 GNB2P62879 340 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 TMEM69Q5SWH9 247 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 FGFRL1Q8N441 504 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 OR4M1Q8NGD0 313 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 OR6Q1Q8NGQ2 317 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 NEK7Q8TDX7 302 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 CYYR1Q96J86 154 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 FAAP24Q9BTP7 215 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 EXTL2Q9UBQ6 330 aa16.43■□□□□ 0.22
PDLIM2-221ENST00000622702 TRAV18A0A075B6X5 111 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 SERPINE3A8MV23 424 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 CD5LO43866 347 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 TPPPO94811 219 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 GSTP1P09211 210 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 GNB3P16520 340 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 NDUFB7P17568 137 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 TALDO1P37837 337 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 MNDAP41218 407 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 GZMKP49863 264 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 ATXN7L3Q14CW9 347 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 ZNF260Q3ZCT1 412 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 CDNFQ49AH0 187 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 CYB5R2Q6BCY4 276 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 CNIH2Q6PI25 160 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 GDPD3Q7L5L3 318 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 GAPTQ8N292 157 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 PLPPR1Q8TBJ4 325 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 COQ2Q96H96 371 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 C1orf159Q96HA4 380 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 DIRAS2Q96HU8 199 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 NIPBLQ6KC79 2804 aaeCLIP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 ABCA2Q9BZC7 2435 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 NSD1Q96L73 2696 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 UBE2QL1A1L167 161 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 KIAA1324LA8MWY0 1029 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 TAS2R20P59543 309 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 RSBN1Q5VWQ0 802 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 ZNF497Q6ZNH5 498 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 LINC00299Q6ZSB3 139 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 IZUMO1Q8IYV9 350 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 NCOR1P1Q9H4R4 102 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 AUNIPQ9H7T9 357 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 ZMAT3Q9HA38 289 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 ETAA1Q9NY74 926 aa16.42■□□□□ 0.22
PDLIM2-221ENST00000622702 TRBV23-1A0A0A0MS06 115 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 FUOMA2VDF0 154 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 FAM157AC9JC47 383 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 PHF1O43189 567 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 FOXH1O75593 365 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 ECDO95905 644 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 MELTFP08582 738 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 P2RX3P56373 397 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 AESQ08117 197 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 EDDM3AQ14507 147 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 PNLIPRP3Q17RR3 467 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 KRBOX4Q5JUW0 171 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 OLFML2AQ68BL7 652 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 SLC35E4Q6ICL7 350 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 DTX3Q8N9I9 347 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 MSI2Q96DH6 328 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 AK3Q9UIJ7 227 aa16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 POLR3KQ9Y2Y1 108 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-221ENST00000622702 ANK3Q12955 4377 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 TMEM30CPA0ZSE6 113 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 HLA-DQB1P01920 261 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 ZNF16P17020 682 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 ZFP36P26651 326 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 EDDM3BP56851 147 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 HACD4Q5VWC8 232 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms