RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 NEUROG1Q92886 237 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR10C1Q96KK4 312 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR2V2Q96R30 315 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SLX1AQ9BQ83 275 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 BCL2L14Q9BZR8 327 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 PARP12Q9H0J9 701 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 ALX4Q9H161 411 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 OPA3Q9H6K4 179 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 DCAF16Q9NXF7 216 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IL36GQ9NZH8 169 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 COMMD9Q9P000 198 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TAAR3PQ9P1P4 343 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR1A1Q9P1Q5 309 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ZNF107Q9UII5 783 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 RNF150Q9ULK6 438 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TACC2O95359 2948 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 USF3Q68DE3 2245 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TRAV14DV4A0A0A6YYC5 116 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IGHV3-43A0A0B4J1X8 118 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IGKV1D-13A0A0B4J2D9 117 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IGKV1-6A0A0C4DH72 117 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 LRP5LA4QPB2 252 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 NKX2-6A6NCS4 301 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 DEFB108AA8MXU0 73 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 C16orf97H3BN30 126 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 M0R233 179 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR2A4O95047 310 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SPDEFO95238 335 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SFT2D2O95562 160 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IGLV1-44P01699 117 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR5AC1P0C628 307 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IGHV3-43DP0DP04 118 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IGKV1-13P0DP09 117 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SELLP14151 372 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ZNF16P17020 682 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 TBPP20226 339 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 GLP1RP43220 463 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IL24Q13007 206 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OPCMLQ14982 345 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 EIF2S3LQ2VIR3 472 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 ALKAL2Q6UX46 152 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SEZ6L2Q6UXD5 910 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ZNF546Q86UE3 836 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TMEM200AQ86VY9 491 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 C11orf53Q8IXP5 236 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 C1orf162Q8NEQ5 155 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR5M8Q8NGP6 311 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RTN4IP1Q8WWV3 396 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR2A7Q96R45 310 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SFXN3Q9BWM7 321 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 MRPL37Q9BZE1 423 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 MFFQ9GZY8 342 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CLEC4MQ9H2X3 399 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.91□□□□□ -1.94
LIG4-205ENST00000614526 CCL28Q9NRJ3 127 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ERRFI1Q9UJM3 462 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 ANAPC10Q9UM13 185 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 NPTNQ9Y639 398 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CACNA1AO00555 2505 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 ANKHD1Q8IWZ3 2542 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 CHD3Q12873 2000 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 DPRXA6NFQ7 191 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 CCL21O00585 134 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 PHF1O43189 567 aaPredicted RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 DUS4LO95620 317 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 HAND1O96004 215 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 PPYP01298 95 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 TK1P04183 234 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 PGA5P0DJD9 388 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 EGR1P18146 543 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 OMGP23515 440 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 DTYMKP23919 212 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 CD40P25942 277 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 ID4P47928 161 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 KLF3P57682 345 aaPredicted RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 BSPH1Q075Z2 132 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 CDSNQ15517 529 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 ZNF660Q6AZW8 331 aaPredicted RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 ELP2Q6IA86 826 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 TMEM211Q6ICI0 200 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 Q6P435 159 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 WDR82Q6UXN9 313 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 GSG1LQ6UXU4 331 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 LYZL2Q7Z4W2 148 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 PEG10Q86TG7 708 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 SGPP2Q8IWX5 399 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 ZNRF1Q8ND25 227 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 OR51H1Q8NH63 302 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 MRPL30Q8TCC3 161 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 MRGPRDQ8TDS7 321 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 ITLN1Q8WWA0 313 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 RND1Q92730 232 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 MRPL24Q96A35 216 aaKnown RBP2.9□□□□□ -1.94
LIG4-205ENST00000614526 WFIKKN1Q96NZ8 548 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 NRIP2Q9BQI9 281 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 SLC5A7Q9GZV3 580 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 Q9N2K0 584 aa2.9□□□□□ -1.94
LIG4-205ENST00000614526 SLC2A9Q9NRM0 540 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms