RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 IL13RA2Q14627 380 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 CD300EQ496F6 205 aaPredicted RBP14.95□□□□□ -0.02
CDK11B-205ENST00000611150 VAX1Q5SQQ9 334 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 C12orf54Q6X4T0 127 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 OR51A4Q8NGJ6 313 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 LRRC61Q9BV99 259 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 DMRT3Q9NQL9 472 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 TRAV27A0A087WT01 109 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 C2orf72A6NCS6 295 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 GPX1P07203 203 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 SLC6A6P31641 620 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 OR6K6Q8NGW6 343 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 OR10AC1Q8NH08 325 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 MAGEH1Q9H213 219 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 SRA1Q9HD15 236 aaKnown RBP14.95□□□□□ -0.02
CDK11B-205ENST00000611150 SLC7A10Q9NS82 523 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 IER3IP1Q9Y5U9 82 aa14.95□□□□□ -0.02
CDK11B-205ENST00000611150 SCN5AQ14524 2016 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 IGLV3-10A0A075B6K4 115 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 A0A0G2JMM0 328 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 A0A1W2PPB8 328 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 MYBPHLA2RUH7 354 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 KIR3DP1A8MWS1 328 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 TTRP02766 147 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 GRPRP30550 384 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 CCKBRP32239 447 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 SFTPDP35247 375 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 MFGE8Q08431 387 aaPredicted RBP14.94□□□□□ -0.02
CDK11B-205ENST00000611150 BVES-AS1Q5T3Y7 98 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 LHX8Q68G74 356 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 BOD1L2Q8IYS8 172 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 FBXL14Q8N1E6 418 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 NKD1Q969G9 470 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 ZDHHC11Q9H8X9 412 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 NPVFQ9HCQ7 196 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 HS3ST3A1Q9Y663 406 aa14.94□□□□□ -0.02
CDK11B-205ENST00000611150 COL4A4P53420 1690 aaPredicted RBP14.94□□□□□ -0.02
CDK11B-205ENST00000611150 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.93□□□□□ -0.02
CDK11B-205ENST00000611150 TRBV5-4A0A0C4DH59 114 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 GAGE12HA6NDE8 117 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 CNIH1O95406 144 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 RTP5Q14D33 572 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 PRTGQ2VWP7 1150 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 RNFT1Q5M7Z0 435 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 WNT10AQ9GZT5 417 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 NUP210LQ5VU65 1888 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 ZNF732B4DXR9 585 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 H3BSH0 61 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 SIRPB1O00241 398 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 KBTBD11O94819 623 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 CATP04040 527 aaKnown RBP14.93□□□□□ -0.02
CDK11B-205ENST00000611150 POU2F2P09086 479 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 CYBAP13498 195 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 ELAVL3Q14576 367 aaKnown RBP14.93□□□□□ -0.02
CDK11B-205ENST00000611150 CEACAM21Q3KPI0 293 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 STUMQ69YW2 141 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 SLC18B1Q6NT16 456 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 ZNF788Q6ZQV5 615 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 OR10P1Q8NGE3 313 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 SLC25A40Q8TBP6 338 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 LINC00470Q9BZP3 86 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 JPT1Q9UK76 154 aa14.93□□□□□ -0.02
CDK11B-205ENST00000611150 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 LRRC3CA6NJW4 275 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 NPIPA5E9PKD4 350 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 NPIPA3F8WFD2 350 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 MPPED1O15442 326 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 XRCC2O43543 280 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
CDK11B-205ENST00000611150 ASCL1P50553 236 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 SQSTM1Q13501 440 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 TMEM164Q5U3C3 297 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 EMG1Q92979 244 aaKnown RBP14.92□□□□□ -0.02
CDK11B-205ENST00000611150 TMEM45BQ96B21 275 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 PRSS27Q9BQR3 290 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 NRN1Q9NPD7 142 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 NPIPA1Q9UND3 350 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 RNF114Q9Y508 228 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 A0A1B0GVT2 93 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 PRR32B1ATL7 298 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 HS3ST1O14792 307 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 GPR75O95800 540 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 NUDT3O95989 172 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 FCRL6Q6DN72 434 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 AGTRAPQ6RW13 159 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 OR5H2Q8NGV7 314 aa14.92□□□□□ -0.02
CDK11B-205ENST00000611150 CEBPZOSA8MTT3 80 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 ERI3O43414 337 aaKnown RBP14.91□□□□□ -0.02
CDK11B-205ENST00000611150 IFNA1P01562 189 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 HIST1H1CP16403 213 aaKnown RBP14.91□□□□□ -0.02
CDK11B-205ENST00000611150 OPRM1P35372 400 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 YPEL3P61236 119 aaPredicted RBP14.91□□□□□ -0.02
CDK11B-205ENST00000611150 PPP1CBP62140 327 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 EWSR1Q01844 656 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDK11B-205ENST00000611150 FAM78BQ5VT40 261 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 LHFPL2Q6ZUX7 228 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 LINC00346Q8IVM7 164 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 FAM46BQ96A09 425 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 ULBP3Q9BZM4 244 aa14.91□□□□□ -0.02
CDK11B-205ENST00000611150 FGF21Q9NSA1 209 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms