RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DEFB127Q9H1M4 99 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 SLC7A10Q9NS82 523 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 MCTS1Q9ULC4 181 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 A0A096LPE4 126 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 A0A1W2PPZ6 126 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 OR6C6A6NF89 314 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 SOCS1O15524 211 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 FCGR2AP12318 317 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 NHLH2Q02577 135 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 POC1AQ8NBT0 407 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 FREM1Q5H8C1 2179 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 IGKV3D-15A0A087WSY6 115 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 CEACAM18A8MTB9 384 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 CASP6P55212 293 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 RAB32Q13637 225 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 KHDC3LQ587J8 217 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 DPPA2Q7Z7J5 298 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 BHLHE23Q8NDY6 225 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 SEMA6DQ8NFY4 1073 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 CD300LFQ8TDQ1 290 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 SSC4DQ8WTU2 575 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 PP6455Q8WZ26 134 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 TMEM45BQ96B21 275 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 METTL9Q9H1A3 318 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 GPR173Q9NS66 373 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 MEMO1Q9Y316 297 aa14.76□□□□□ -0.05
SHKBP1-205ENST00000594973 BOD1L1Q8NFC6 3051 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 A0A087WWC5 75 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 ZNHIT1O43257 154 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 CHATP28329 748 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HRH1P35367 487 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 CRIP3Q6Q6R5 217 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 CNTNAP3Q9BZ76 1288 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 PRO1933Q9H354 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 ELL3Q9HB65 397 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 FBLN5Q9UBX5 448 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 MYO7BQ6PIF6 2116 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 CDRT15L2A8MXV6 281 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BKO60814 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BJP06899 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 DANCRP0C864 163 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BOP23527 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BBP33778 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 NUBP1P53384 320 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 FOXG1P55316 489 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BDP58876 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 PCBD1P61457 104 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BCP62807 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 ARF1P84077 181 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 SLC10A1Q14973 349 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST2H2BEQ16778 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 ZNF766Q5HY98 468 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 PLAC9Q5JTB6 97 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 OR51F2Q8NH61 342 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 MARCH1Q8TCQ1 289 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BHQ93079 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BNQ99877 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H2BMQ99879 126 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 ARV1Q9H2C2 271 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 LUZP4Q9P127 313 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 AMDHD2Q9Y303 409 aa14.75□□□□□ -0.05
SHKBP1-205ENST00000594973 SCGNO76038 276 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 SEC11BP0C7V7 166 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 SERPINA2P20848 420 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 ZNF674Q2M3X9 581 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 RNFT1Q5M7Z0 435 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 SPNS3Q6ZMD2 512 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 TERB2Q8NHR7 220 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 NDUFAF3Q9BU61 184 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 GPR61Q9BZJ8 451 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 GPR132Q9UNW8 380 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 A8MWP6 167 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 SOD3P08294 240 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 LMO1P25800 156 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 CCL11P51671 97 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 NKX6-1P78426 367 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 ANKRD39Q53RE8 183 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 CLEC18BQ6UXF7 455 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 ZFP62Q8NB50 900 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 LFNGQ8NES3 379 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 SCGB3A2Q96PL1 93 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 ZNF552Q9H707 407 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 WASF3Q9UPY6 502 aa14.74□□□□□ -0.05
SHKBP1-205ENST00000594973 CHRM2P08172 466 aa14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 MMP7P09237 267 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 OR8G1Q15617 311 aa14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 USF2Q15853 346 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 CPEB3Q8NE35 698 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 OR10AD1Q8NGE0 317 aa14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 OR51T1Q8NGJ9 327 aa14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 ARHGAP5-AS1Q96IT6 56 aa14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 ASCL3Q9NQ33 180 aa14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 STRAPQ9Y3F4 350 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-205ENST00000594973 FAM230AA0A1W2PPH8 454 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 CCNOP22674 350 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 CD82P27701 267 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 RPL12P30050 165 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 RRADP55042 308 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 TMEM50BP56557 158 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms