RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 HIST2H2BEQ16778 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 KHDC3LQ587J8 217 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-202ENST00000553340 DPPA3Q6W0C5 159 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CMTM1Q8IZ96 169 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BHQ93079 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BNQ99877 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BMQ99879 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 SF3B5Q9BWJ5 86 aaKnown RBP15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CNTRLQ7Z7A1 2325 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CLEC18AA5D8T8 446 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 RPL36A-HNRNPH2H7BZ11 118 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 PATE4P0C8F1 98 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 SRFP11831 508 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 EPHA1P21709 976 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 VDAC1P21796 283 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 RAC1P63000 192 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF92Q03936 586 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF383Q8NA42 475 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CLEC18CQ8NCF0 446 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 OR13D1Q8NGV5 346 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 TECTBQ96PL2 329 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 SRXN1Q9BYN0 137 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIPK2Q9H2X6 1198 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF816-ZNF321PA0A0X1KG74 233 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 TMEM50AO95807 157 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 CELA2AP08217 269 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 B4GALT1P15291 398 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 KRTAP27-1Q3LI81 207 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 NMSQ5H8A3 153 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF818PQ6ZRF7 136 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 ODF3L1Q8IXM7 274 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF611Q8N823 705 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 EXTL1Q92935 676 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 POM121Q96HA1 1249 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 SIGLEC12Q96PQ1 595 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 EYSQ5T1H1 3165 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF587BE7ETH6 402 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 G3V3Y1 287 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 PPP1R2P9O14990 202 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 F10P00742 488 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 NKX6-1P78426 367 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-202ENST00000553340 PSG4Q00888 419 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 PCOLCEQ15113 449 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 SPNS3Q6ZMD2 512 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 Q6ZS49 121 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 SLC25A26Q70HW3 274 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 CALHM1Q8IU99 346 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 GAPTQ8N292 157 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 OR10D4PQ8NGN7 298 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 CPT1CQ8TCG5 803 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 ATP5SQ99766 215 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 AKIRIN1Q9H9L7 192 aaPredicted RBP15.11■□□□□ 0.01
SYNE3-202ENST00000553340 CA14Q9ULX7 337 aa15.11■□□□□ 0.01
SYNE3-202ENST00000553340 CCDC163A0A0D9SF12 145 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 GJE1A6NN92 205 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 B4DEV8 164 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 CHST1O43916 411 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 TAS2R30P59541 319 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 HLA-DRB3P79483 266 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 DEFA6Q01524 100 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF154Q13106 437 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 MRPL14Q6P1L8 145 aaKnown RBP15.1■□□□□ 0.01
SYNE3-202ENST00000553340 P4HA3Q7Z4N8 544 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 HS3ST3B1Q9Y662 390 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 CEP290O15078 2479 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 TRGC2P03986 189 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 CYC1P08574 325 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 UCP1P25874 307 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 NPBWR2P48146 333 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 FOXO1Q12778 655 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 IL24Q13007 206 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 BATF2Q8N1L9 274 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 ALKBH3Q96Q83 286 aaPredicted RBP15.1■□□□□ 0.01
SYNE3-202ENST00000553340 PROK2Q9HC23 129 aa15.1■□□□□ 0.01
SYNE3-202ENST00000553340 CEP192Q8TEP8 1941 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 ELOA3CA0A087WX78 387 aaPredicted RBP15.09■□□□□ 0.01
SYNE3-202ENST00000553340 HAAOP46952 286 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 DAZAP2Q15038 168 aaPredicted RBP15.09■□□□□ 0.01
SYNE3-202ENST00000553340 OR8G1Q15617 311 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 OR10G4Q8NGN3 311 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 NAT6Q93015 286 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 Q9N2K0 584 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 IGHV5-10-1A0A0J9YXX1 117 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 A0A1W2PQM1 296 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 SLC33A1O00400 549 aaPredicted RBP15.09■□□□□ 0.01
SYNE3-202ENST00000553340 NXPH3O95157 252 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 RAC3P60763 192 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 SRSF7Q16629 238 aaKnown RBP eCLIP15.09■□□□□ 0.01
SYNE3-202ENST00000553340 GUSBP11Q6P575 273 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 GPHA2Q96T91 129 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 OR2H1Q9GZK4 316 aa15.09■□□□□ 0.01
SYNE3-202ENST00000553340 LOC102723971A0A1B0GUV8 181 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A10PA6NDY2 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A18PA6NE21 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A16PA6NEW6 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A20PA6NIJ5 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A8PA6NJQ4 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A7PA6NKC0 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A22PA8MWA6 464 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms